Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G024500.1 | Wheat | cytosol | 91.01 | 90.6 |
| TraesCS6B01G430300.1 | Wheat | cytosol | 87.42 | 86.44 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 83.82 | 84.01 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 29.44 | 83.97 |
| TraesCS4A01G287700.1 | Wheat | mitochondrion | 29.44 | 83.97 |
| TraesCS4A01G285200.1 | Wheat | cytosol | 87.42 | 83.66 |
| TraesCS4A01G287500.1 | Wheat | cytosol | 87.19 | 83.44 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 44.04 | 52.13 |
| Solyc11g066640.1.1 | Tomato | cytosol | 50.79 | 51.48 |
| TraesCS5B01G337000.1 | Wheat | cytosol | 51.01 | 51.47 |
| Solyc06g074710.1.1 | Tomato | cytosol | 50.79 | 50.9 |
| PGSC0003DMT400001145 | Potato | cytosol | 50.34 | 50.79 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 44.04 | 50.78 |
| PGSC0003DMT400018441 | Potato | cytosol | 50.56 | 50.56 |
| TraesCS5B01G337100.1 | Wheat | cytosol | 49.89 | 50.34 |
| TraesCS2B01G519100.1 | Wheat | cytosol | 49.21 | 49.77 |
| TraesCS2B01G518900.1 | Wheat | cytosol | 49.21 | 49.66 |
| TraesCS5B01G304300.1 | Wheat | cytosol | 48.54 | 49.54 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 39.1 | 49.43 |
| TraesCS5B01G336300.1 | Wheat | cytosol | 48.09 | 49.31 |
| TraesCS7B01G410100.1 | Wheat | cytosol | 48.54 | 49.09 |
| TraesCS2B01G518300.1 | Wheat | cytosol | 48.54 | 48.98 |
| TraesCS6B01G412900.1 | Wheat | peroxisome | 48.54 | 48.98 |
| TraesCS5B01G336500.1 | Wheat | cytosol | 47.42 | 48.62 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 37.75 | 48.41 |
| TraesCS5B01G336700.1 | Wheat | cytosol | 46.97 | 48.16 |
| TraesCS5B01G336600.1 | Wheat | cytosol | 46.97 | 48.16 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 37.3 | 48.12 |
| TraesCS2B01G604000.1 | Wheat | cytosol | 47.64 | 47.86 |
| Solyc11g071470.1.1 | Tomato | cytosol | 47.19 | 47.4 |
| Solyc11g071480.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 46.97 | 47.18 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 43.15 | 46.94 |
| PGSC0003DMT400048126 | Potato | cytosol | 42.92 | 42.35 |
| TraesCS2B01G604100.1 | Wheat | peroxisome | 42.7 | 42.22 |
| TraesCS1B01G107400.1 | Wheat | cytosol | 38.43 | 39.04 |
| TraesCS1B01G107500.1 | Wheat | cytosol | 38.2 | 38.81 |
| TraesCS4B01G302100.1 | Wheat | cytosol | 37.53 | 38.75 |
| TraesCS4B01G302000.1 | Wheat | cytosol, extracellular, peroxisome | 37.3 | 38.52 |
| TraesCS1B01G107300.1 | Wheat | cytosol | 37.53 | 38.48 |
| TraesCS4B01G384800.1 | Wheat | cytosol | 36.4 | 37.59 |
| TraesCS4B01G302200.1 | Wheat | mitochondrion, peroxisome | 35.96 | 36.95 |
| TraesCS2B01G606400.1 | Wheat | cytosol | 35.51 | 36.92 |
| PGSC0003DMT400048130 | Potato | cytoskeleton, cytosol, peroxisome | 46.74 | 36.56 |
| TraesCS4B01G302300.1 | Wheat | cytosol | 33.71 | 34.97 |
| TraesCS6B01G322500.1 | Wheat | cytosol | 34.83 | 34.68 |
| TraesCS5B01G136200.1 | Wheat | plastid | 32.13 | 32.8 |
| TraesCS3B01G234500.1 | Wheat | cytosol | 29.89 | 31.59 |
| TraesCS5B01G221700.1 | Wheat | cytosol | 29.66 | 30.41 |
| TraesCS7B01G455100.1 | Wheat | cytosol | 28.54 | 29.4 |
| TraesCS6B01G249400.1 | Wheat | cytosol, golgi | 28.31 | 28.57 |
| TraesCS5B01G222000.1 | Wheat | plastid | 27.42 | 27.85 |
| TraesCS3B01G545700.1 | Wheat | cytosol, peroxisome, plastid | 26.97 | 27.33 |
| TraesCS7B01G054100.1 | Wheat | cytosol | 26.29 | 27.27 |
| TraesCS3B01G486400.1 | Wheat | cytosol | 26.52 | 27.19 |
| TraesCS5B01G461000.1 | Wheat | peroxisome | 27.64 | 27.15 |
| TraesCS2B01G374600.1 | Wheat | mitochondrion | 26.52 | 26.94 |
| TraesCS6B01G030800.1 | Wheat | peroxisome | 26.29 | 26.65 |
| TraesCS3B01G002000.1 | Wheat | mitochondrion | 26.07 | 26.61 |
| TraesCS3B01G485500.1 | Wheat | cytosol | 26.07 | 26.42 |
| TraesCS3B01G488100.1 | Wheat | peroxisome | 25.62 | 26.33 |
| TraesCS6B01G030300.1 | Wheat | peroxisome | 25.84 | 26.2 |
| TraesCS3B01G574700.1 | Wheat | peroxisome | 25.62 | 26.09 |
| TraesCS3B01G350400.1 | Wheat | peroxisome | 25.39 | 25.62 |
| TraesCS7B01G054000.1 | Wheat | cytosol | 24.49 | 25.35 |
| TraesCS6B01G017400.1 | Wheat | cytosol | 24.72 | 25.29 |
| TraesCS5B01G038600.1 | Wheat | cytosol | 25.17 | 25.17 |
| TraesCS1B01G005300.1 | Wheat | mitochondrion | 22.02 | 24.62 |
| TraesCS3B01G485400.1 | Wheat | plasma membrane | 25.39 | 24.2 |
| TraesCS6B01G288300.1 | Wheat | peroxisome | 22.47 | 22.88 |
| TraesCS6B01G030200.1 | Wheat | cytosol | 6.07 | 20.45 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G026800.1 | EnsemblPlantsGene:TraesCS4B01G026800 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF13 |
| PFAM:PF02458 | MapMan:50.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:20305400..20306737
Molecular Weight (calculated)
48785.4 Da
IEP (calculated)
8.233
GRAVY (calculated)
-0.121
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVKIESSKI VKPSYEDGEA PAHAQRVPLS VFDKVTYGEH VALIFAFRPP NPPNSEVELG LAKALAVYRE WAGRIRDGRR SVLLNDAGAR FVEATVDAPM
101: AVSMPSGPSP EVRLLHPRID GSPVELVQVQ LTRFSCGSLA VGFAGHHQIA DGQATANFLA AWGLATRRQP LSPLPVCDRS TRFAPRDPPL VEFPHREVEY
201: RAPAPNKKRD IALDDEKEEI GFGVAGHDKV KVHRMHLSKD FVAQLKARAS SALPPSRRGY TTFQSVVAHL WRAITAARGL AAGVTTKVRI SVNGRTRMRP
301: PVPRDYFGNV VLWAFPRSNV GELVSRPVGH AAELIYRAVA GVDNAYFRSF VDFAAEVEAE GLIPTADSEQ AVLCPDLEVD AWLGINFHGL DFGGGGPFCV
401: VPTYYPMEGS LFLVPSTLGD GSMEAYVALF HNHLEEFKRI CYRIT
101: AVSMPSGPSP EVRLLHPRID GSPVELVQVQ LTRFSCGSLA VGFAGHHQIA DGQATANFLA AWGLATRRQP LSPLPVCDRS TRFAPRDPPL VEFPHREVEY
201: RAPAPNKKRD IALDDEKEEI GFGVAGHDKV KVHRMHLSKD FVAQLKARAS SALPPSRRGY TTFQSVVAHL WRAITAARGL AAGVTTKVRI SVNGRTRMRP
301: PVPRDYFGNV VLWAFPRSNV GELVSRPVGH AAELIYRAVA GVDNAYFRSF VDFAAEVEAE GLIPTADSEQ AVLCPDLEVD AWLGINFHGL DFGGGGPFCV
401: VPTYYPMEGS LFLVPSTLGD GSMEAYVALF HNHLEEFKRI CYRIT
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.