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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, peroxisome, plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G492400.1 Wheat cytosol 90.43 91.06
TraesCS3B01G486400.1 Wheat cytosol 78.59 79.49
TraesCS3B01G485500.1 Wheat cytosol 73.12 73.12
TraesCS5B01G461000.1 Wheat peroxisome 72.89 70.64
TraesCS3B01G574700.1 Wheat peroxisome 67.2 67.51
TraesCS3B01G488100.1 Wheat peroxisome 64.46 65.36
TraesCS3B01G485400.1 Wheat plasma membrane 68.79 64.67
TraesCS5B01G038600.1 Wheat cytosol 56.95 56.18
TraesCS6B01G288300.1 Wheat peroxisome 52.85 53.09
TraesCS6B01G030300.1 Wheat peroxisome 52.62 52.62
TraesCS6B01G030800.1 Wheat peroxisome 52.62 52.62
TraesCS5B01G221700.1 Wheat cytosol 46.7 47.23
TraesCS6B01G030200.1 Wheat cytosol 13.9 46.21
TraesCS7B01G455100.1 Wheat cytosol 44.65 45.37
TraesCS5B01G222000.1 Wheat plastid 41.46 41.55
TraesCS7B01G054000.1 Wheat cytosol 37.36 38.14
TraesCS7B01G054100.1 Wheat cytosol 37.13 38.0
TraesCS6B01G017400.1 Wheat cytosol 36.67 37.01
TraesCS3B01G002000.1 Wheat mitochondrion 35.99 36.24
TraesCS3B01G350400.1 Wheat peroxisome 36.22 36.05
TraesCS2B01G374600.1 Wheat mitochondrion 35.76 35.84
TraesCS6B01G249400.1 Wheat cytosol, golgi 35.54 35.37
TraesCS1B01G005300.1 Wheat mitochondrion 28.93 31.91
TraesCS2B01G519100.1 Wheat cytosol 27.56 27.5
TraesCS2B01G518900.1 Wheat cytosol 27.11 26.98
TraesCS4B01G026800.1 Wheat cytosol 27.33 26.97
TraesCS6B01G430300.1 Wheat cytosol 26.88 26.22
TraesCS2B01G518300.1 Wheat cytosol 25.97 25.85
TraesCS7B01G410100.1 Wheat cytosol 25.74 25.68
TraesCS4B01G302100.1 Wheat cytosol 25.06 25.52
TraesCS5B01G336300.1 Wheat cytosol 25.06 25.35
TraesCS4B01G384800.1 Wheat cytosol 24.83 25.29
TraesCS5B01G336600.1 Wheat cytosol 24.83 25.12
TraesCS5B01G336500.1 Wheat cytosol 24.83 25.12
TraesCS1B01G107400.1 Wheat cytosol 25.06 25.11
TraesCS1B01G107500.1 Wheat cytosol 25.06 25.11
TraesCS6B01G412900.1 Wheat peroxisome 25.06 24.94
TraesCS5B01G336700.1 Wheat cytosol 24.6 24.88
TraesCS1B01G107300.1 Wheat cytosol 24.37 24.65
TraesCS4B01G302000.1 Wheat cytosol, extracellular, peroxisome 24.15 24.59
TraesCS2B01G606400.1 Wheat cytosol 23.92 24.53
TraesCS5B01G337000.1 Wheat cytosol 24.6 24.49
TraesCS5B01G304300.1 Wheat cytosol 24.15 24.31
TraesCS2B01G604000.1 Wheat cytosol 24.15 23.93
TraesCS5B01G337100.1 Wheat cytosol 23.92 23.81
TraesCS5B01G136200.1 Wheat plastid 22.55 22.71
TraesCS4B01G302200.1 Wheat mitochondrion, peroxisome 22.1 22.4
TraesCS4B01G302300.1 Wheat cytosol 21.87 22.38
TraesCS2B01G604100.1 Wheat peroxisome 22.78 22.22
TraesCS6B01G322500.1 Wheat cytosol 22.32 21.92
TraesCS3B01G234500.1 Wheat cytosol 18.68 19.48
Protein Annotations
EnsemblPlants:TraesCS3B01G545700.1EnsemblPlantsGene:TraesCS3B01G545700Gene3D:3.30.559.10GO:GO:0003674GO:GO:0003824GO:GO:0016740
GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31642PANTHER:PTHR31642:SF16
PFAM:PF02458SEG:segSUPFAM:SSF52777MapMan:50.2.3::
Description
No Description!
Coordinates
chr3B:+:782677263..782678836
Molecular Weight (calculated)
47221.1 Da
IEP (calculated)
7.271
GRAVY (calculated)
0.145
Length
439 amino acids
Sequence
(BLAST)
001: MGVVGQQEVE VLESCMVKPS VETPSHGLWL SQLDLKMVNR GHTPNVYFYT PHSGAVGNFF DVARLKAAMA KALVPFYPLA GRLGVDGEGQ PEIDCAGQGV
101: LFVVARSDLT VDGFVDFQPS PELRRLFVPR VEDSPSIMCA IQVTFMGCGG VALGTALHHV AIDAVSAVHF FQTWSGFCRD GDAAAAVLEL PCHDRTLLRA
201: RSPPVVHPDA LTVFSCPKLS LAVSAEPSGA VVNKIFVLSN DQVAALKRAC TGGGDGGRVS TFCAVSAHVW RSMCTARRLP TDARTRLTFP ANIRGALRPP
301: LPARYFGNGI IVLGAAGRVR DIESEELGSV AHRISGAVGR MDDELVRSAI DYLEINGKSK QPPSSMPETE LRVVSWLGMP VYDVDFGWGK PLVMHRAVQQ
401: RAGMVYLMDG VSGSGGVRIL VSTEAVILND FQRLLYANF
Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.