Factsheet for TraesCS1B01G107300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G088400.1	Wheat	cytosol	96.08	95.21
TraesCS1B01G107400.1	Wheat	cytosol	95.62	94.75
TraesCS1D01G089600.1	Wheat	cytosol	95.16	94.29
TraesCS1B01G107500.1	Wheat	cytosol	93.78	92.92
HORVU1Hr1G019380.2	Barley	cytosol, mitochondrion, plasma membrane	94.93	88.79
Os10t0380100-01	Rice	mitochondrion	54.38	78.41
Zm00001d030542_P001	Maize	plastid	75.12	73.92
Os10t0379100-01	Rice	cytosol	73.27	72.94
TraesCS4B01G302000.1	Wheat	cytosol, extracellular, peroxisome	62.21	62.65
TraesCS4B01G302100.1	Wheat	cytosol	61.06	61.48
TraesCS4B01G384800.1	Wheat	cytosol	59.22	59.63
TraesCS4B01G302200.1	Wheat	mitochondrion, peroxisome	59.45	59.58
TraesCS2B01G606400.1	Wheat	cytosol	56.45	57.24
TraesCS6B01G322500.1	Wheat	cytosol	57.14	55.48
TraesCS4B01G302300.1	Wheat	cytosol	53.92	54.55
Zm00001d030540_P001	Maize	plastid	33.87	53.85
TraesCS3B01G234500.1	Wheat	cytosol	46.54	47.98
TraesCS5B01G336300.1	Wheat	cytosol	38.48	38.48
TraesCS4B01G026800.1	Wheat	cytosol	38.48	37.53
TraesCS5B01G336500.1	Wheat	cytosol	36.87	36.87
TraesCS5B01G336600.1	Wheat	cytosol	36.87	36.87
TraesCS5B01G336700.1	Wheat	cytosol	36.41	36.41
TraesCS5B01G337000.1	Wheat	cytosol	36.64	36.05
TraesCS5B01G304300.1	Wheat	cytosol	36.18	36.01
TraesCS5B01G136200.1	Wheat	plastid	35.94	35.78
TraesCS6B01G430300.1	Wheat	cytosol	36.87	35.56
TraesCS5B01G337100.1	Wheat	cytosol	35.94	35.37
TraesCS2B01G519100.1	Wheat	cytosol	35.71	35.23
TraesCS7B01G410100.1	Wheat	cytosol	35.25	34.77
TraesCS2B01G518900.1	Wheat	cytosol	35.02	34.47
TraesCS6B01G412900.1	Wheat	peroxisome	34.79	34.24
TraesCS2B01G518300.1	Wheat	cytosol	34.56	34.01
TraesCS2B01G604000.1	Wheat	cytosol	34.56	33.86
TraesCS2B01G604100.1	Wheat	peroxisome	34.1	32.89
TraesCS7B01G455100.1	Wheat	cytosol	27.88	28.01
TraesCS5B01G222000.1	Wheat	plastid	26.73	26.48
TraesCS5B01G221700.1	Wheat	cytosol	26.27	26.27
TraesCS7B01G054000.1	Wheat	cytosol	25.58	25.81
TraesCS3B01G485500.1	Wheat	cytosol	26.04	25.74
TraesCS7B01G054100.1	Wheat	cytosol	25.12	25.41
TraesCS6B01G249400.1	Wheat	cytosol, golgi	25.81	25.4
TraesCS3B01G002000.1	Wheat	mitochondrion	25.35	25.23
TraesCS5B01G038600.1	Wheat	cytosol	25.58	24.94
TraesCS3B01G350400.1	Wheat	peroxisome	25.12	24.72
TraesCS2B01G374600.1	Wheat	mitochondrion	24.88	24.66
TraesCS3B01G486400.1	Wheat	cytosol	24.65	24.65
TraesCS6B01G030300.1	Wheat	peroxisome	24.88	24.6
TraesCS3B01G545700.1	Wheat	cytosol, peroxisome, plastid	24.65	24.37
TraesCS6B01G017400.1	Wheat	cytosol	24.42	24.37
TraesCS3B01G574700.1	Wheat	peroxisome	24.19	24.03
TraesCS6B01G030800.1	Wheat	peroxisome	24.19	23.92
TraesCS5B01G461000.1	Wheat	peroxisome	24.65	23.62
TraesCS3B01G485400.1	Wheat	plasma membrane	24.65	22.91
TraesCS3B01G488100.1	Wheat	peroxisome	22.81	22.86
TraesCS6B01G288300.1	Wheat	peroxisome	22.81	22.65
TraesCS6B01G030200.1	Wheat	cytosol	6.68	21.97
TraesCS1B01G005300.1	Wheat	mitochondrion	19.12	20.85

Protein Annotations

EnsemblPlants:TraesCS1B01G107300.1	EnsemblPlantsGene:TraesCS1B01G107300	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF35
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr1B:-:119248046..119249874

Molecular Weight (calculated)

47251.2 Da

IEP (calculated)

5.393

GRAVY (calculated)

-0.016

Length

434 amino acids

Sequence
(BLAST)

001: MAVTVEITQR TVLEPSRDSA RGGGKKVPLT VFDRASTDGY IPAVFAWNAP APTNDALKAG LVAAVARFPH LAGRFAADDH GRKCFHLNDA GVLVLEATAD
101: ADLADALAHD VSAHINELYP KAEKERANAP IFQAQLTRYA CGGLVIGTAC HHQVADGQSM SVFYTAWASA VRTDSAVLMS PFVDRSATVV PRSPPTPAHD
201: HRNIEFKGEL SWSHSYGVLS MDRIKNLAVH FPDEFVADLK ARVGTRCSTF QCLLAHAWKK ITAARDLAPD DFTQVRVAVN CRGRAKPSVP MDFFGNMVLW
301: AFPRMQVRDL LSSSYPAVVG AIRDAVALVD DEYIQSFIDF GEAERDGGEE LASTAATPGT MFCPDLEIDS WLGFRFHDLD FGCGPPCAFL PPDLPIEGIM
401: IFVPSCDPKG GVDLFMALDD EHVRAFKQIC YSMD

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.