Factsheet for TraesCS3B01G574700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G436700.1	Wheat	peroxisome	85.58	87.59
TraesCS3D01G514600.1	Wheat	peroxisome	89.24	87.44
TraesCS3A01G507100.1	Wheat	peroxisome	84.44	86.82
TraesCS3A01G506800.1	Wheat	peroxisome	88.1	86.32
TraesCS5B01G461000.1	Wheat	peroxisome	75.51	72.85
TraesCS3B01G545700.1	Wheat	cytosol, peroxisome, plastid	67.51	67.2
TraesCS3B01G486400.1	Wheat	cytosol	63.39	63.82
TraesCS3B01G485500.1	Wheat	cytosol	63.62	63.33
TraesCS3B01G488100.1	Wheat	peroxisome	59.27	59.82
TraesCS3B01G485400.1	Wheat	plasma membrane	59.5	55.67
TraesCS5B01G038600.1	Wheat	cytosol	54.46	53.48
TraesCS6B01G030800.1	Wheat	peroxisome	52.4	52.16
TraesCS6B01G030300.1	Wheat	peroxisome	52.4	52.16
TraesCS6B01G288300.1	Wheat	peroxisome	51.03	51.03
TraesCS6B01G030200.1	Wheat	cytosol	14.19	46.97
TraesCS7B01G455100.1	Wheat	cytosol	44.62	45.14
TraesCS5B01G221700.1	Wheat	cytosol	43.48	43.78
TraesCS5B01G222000.1	Wheat	plastid	40.96	40.87
TraesCS7B01G054000.1	Wheat	cytosol	37.53	38.14
TraesCS7B01G054100.1	Wheat	cytosol	36.84	37.53
TraesCS6B01G017400.1	Wheat	cytosol	36.61	36.78
TraesCS3B01G350400.1	Wheat	peroxisome	36.16	35.83
TraesCS3B01G002000.1	Wheat	mitochondrion	35.47	35.55
TraesCS6B01G249400.1	Wheat	cytosol, golgi	34.32	34.01
TraesCS2B01G374600.1	Wheat	mitochondrion	33.64	33.56
TraesCS1B01G005300.1	Wheat	mitochondrion	29.29	32.16
TraesCS2B01G519100.1	Wheat	cytosol	26.77	26.59
TraesCS2B01G518900.1	Wheat	cytosol	26.77	26.53
TraesCS2B01G518300.1	Wheat	cytosol	26.54	26.3
TraesCS4B01G026800.1	Wheat	cytosol	26.09	25.62
TraesCS7B01G410100.1	Wheat	cytosol	25.4	25.23
TraesCS6B01G412900.1	Wheat	peroxisome	25.17	24.94
TraesCS1B01G107500.1	Wheat	cytosol	24.94	24.89
TraesCS2B01G604000.1	Wheat	cytosol	25.17	24.83
TraesCS6B01G430300.1	Wheat	cytosol	25.4	24.67
TraesCS5B01G336300.1	Wheat	cytosol	24.49	24.65
TraesCS1B01G107400.1	Wheat	cytosol	24.49	24.43
TraesCS5B01G336500.1	Wheat	cytosol	24.26	24.42
TraesCS4B01G302100.1	Wheat	cytosol	24.03	24.36
TraesCS2B01G606400.1	Wheat	cytosol	23.8	24.3
TraesCS1B01G107300.1	Wheat	cytosol	24.03	24.19
TraesCS5B01G336700.1	Wheat	cytosol	24.03	24.19
TraesCS5B01G336600.1	Wheat	cytosol	24.03	24.19
TraesCS5B01G337000.1	Wheat	cytosol	24.26	24.04
TraesCS4B01G302000.1	Wheat	cytosol, extracellular, peroxisome	23.57	23.9
TraesCS5B01G337100.1	Wheat	cytosol	24.03	23.81
TraesCS5B01G304300.1	Wheat	cytosol	23.57	23.62
TraesCS4B01G384800.1	Wheat	cytosol	23.11	23.43
TraesCS2B01G604100.1	Wheat	peroxisome	24.03	23.33
TraesCS4B01G302200.1	Wheat	mitochondrion, peroxisome	23.11	23.33
TraesCS6B01G322500.1	Wheat	cytosol	22.2	21.7
TraesCS4B01G302300.1	Wheat	cytosol	20.82	21.21
TraesCS5B01G136200.1	Wheat	plastid	20.14	20.18
TraesCS3B01G234500.1	Wheat	cytosol	16.48	17.1

Protein Annotations

EnsemblPlants:TraesCS3B01G574700.1	EnsemblPlantsGene:TraesCS3B01G574700	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	MapMan:50.2.3	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:805037765..805042287

Molecular Weight (calculated)

47839.0 Da

IEP (calculated)

6.696

GRAVY (calculated)

0.212

Length

437 amino acids

Sequence
(BLAST)

001: MGVDEVEVVE SCMVAPCQET PRRGMWLSPL DLMLVNRGLT PAVYFYPYRS GLSDFFDVAR LKAAMAMALV AFYPLAGRLG MDGNDRAEID CTGEGALLVV
101: ARSDLTIDDL CGFLPSPELR TLFVPRVEDY SPSVLCAVQV TFFKCGGVAL GTALHHVAVN AISAFHFLQT WSAFSRVGGA AALELPFHDR TLLRARPPPF
201: VHSDAFSVFC PKLNLSVEPS ETVVTQAFVV SKDQITTLKR ACIGSDGGRV STFYALSAHA WRCVCVARRL PPDATTRLTF PASVQHSMRP PLPPGYCGNG
301: IIWLGAAGKV RDVTSSESED LVFVAGQISS AVRRMDDELV RSVIDYFVMT ILRSTSHEPA PGRMPDTELR VISWLGMPVY NVEFGWGKPL VMLRAVSERA
401: GFVYLMDSGK GDGSVRVLMC TEAAILNDFQ RLLYARF

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.