Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G490400.1 | Wheat | cytosol | 95.24 | 95.24 |
| TraesCS2A01G490000.1 | Wheat | cytosol | 94.78 | 94.78 |
| HORVU2Hr1G109430.2 | Barley | cytosol | 93.65 | 94.29 |
| TraesCS2B01G519100.1 | Wheat | cytosol | 80.5 | 80.68 |
| TraesCS2B01G518900.1 | Wheat | cytosol | 80.5 | 80.5 |
| Os04t0664500-01 | Rice | cytosol | 21.77 | 76.8 |
| Os04t0664600-00 | Rice | cytosol | 75.96 | 74.61 |
| TraesCS7B01G410100.1 | Wheat | cytosol | 68.03 | 68.18 |
| TraesCS6B01G412900.1 | Wheat | peroxisome | 66.44 | 66.44 |
| TraesCS2B01G604000.1 | Wheat | cytosol | 57.82 | 57.56 |
| TraesCS2B01G604100.1 | Wheat | peroxisome | 55.78 | 54.67 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 44.67 | 52.39 |
| Solyc11g066640.1.1 | Tomato | cytosol | 52.15 | 52.39 |
| PGSC0003DMT400001145 | Potato | cytosol | 52.38 | 52.38 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 44.9 | 51.3 |
| PGSC0003DMT400018441 | Potato | cytosol | 51.47 | 51.01 |
| Solyc06g074710.1.1 | Tomato | cytosol | 51.25 | 50.9 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 40.59 | 50.85 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 39.68 | 50.72 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 39.68 | 50.43 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 45.35 | 48.9 |
| TraesCS5B01G304300.1 | Wheat | cytosol | 48.3 | 48.85 |
| TraesCS4B01G026800.1 | Wheat | cytosol | 48.98 | 48.54 |
| TraesCS5B01G336300.1 | Wheat | cytosol | 47.62 | 48.39 |
| TraesCS6B01G430300.1 | Wheat | cytosol | 49.21 | 48.22 |
| TraesCS5B01G337100.1 | Wheat | cytosol | 47.62 | 47.62 |
| TraesCS5B01G336600.1 | Wheat | cytosol | 46.71 | 47.47 |
| TraesCS5B01G337000.1 | Wheat | cytosol | 47.39 | 47.39 |
| Solyc11g071470.1.1 | Tomato | cytosol | 47.39 | 47.18 |
| Solyc11g071480.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 47.39 | 47.18 |
| TraesCS5B01G336700.1 | Wheat | cytosol | 46.26 | 47.0 |
| TraesCS5B01G336500.1 | Wheat | cytosol | 46.26 | 47.0 |
| PGSC0003DMT400048126 | Potato | cytosol | 41.72 | 40.8 |
| TraesCS2B01G606400.1 | Wheat | cytosol | 36.51 | 37.62 |
| TraesCS4B01G302100.1 | Wheat | cytosol | 36.51 | 37.35 |
| PGSC0003DMT400048130 | Potato | cytoskeleton, cytosol, peroxisome | 47.62 | 36.91 |
| TraesCS4B01G302200.1 | Wheat | mitochondrion, peroxisome | 35.6 | 36.26 |
| TraesCS4B01G302000.1 | Wheat | cytosol, extracellular, peroxisome | 35.37 | 36.19 |
| TraesCS4B01G384800.1 | Wheat | cytosol | 34.92 | 35.73 |
| TraesCS1B01G107500.1 | Wheat | cytosol | 35.37 | 35.62 |
| TraesCS1B01G107400.1 | Wheat | cytosol | 34.92 | 35.16 |
| TraesCS1B01G107300.1 | Wheat | cytosol | 34.01 | 34.56 |
| TraesCS6B01G322500.1 | Wheat | cytosol | 33.33 | 32.89 |
| TraesCS5B01G136200.1 | Wheat | plastid | 32.43 | 32.8 |
| TraesCS4B01G302300.1 | Wheat | cytosol | 31.52 | 32.4 |
| TraesCS3B01G002000.1 | Wheat | mitochondrion | 30.61 | 30.96 |
| TraesCS2B01G374600.1 | Wheat | mitochondrion | 30.61 | 30.82 |
| TraesCS7B01G054100.1 | Wheat | cytosol | 29.48 | 30.3 |
| TraesCS6B01G249400.1 | Wheat | cytosol, golgi | 29.71 | 29.71 |
| TraesCS3B01G234500.1 | Wheat | cytosol | 28.12 | 29.45 |
| TraesCS5B01G222000.1 | Wheat | plastid | 28.34 | 28.54 |
| TraesCS3B01G350400.1 | Wheat | peroxisome | 28.34 | 28.34 |
| TraesCS7B01G455100.1 | Wheat | cytosol | 26.98 | 27.55 |
| TraesCS6B01G030800.1 | Wheat | peroxisome | 27.21 | 27.33 |
| TraesCS7B01G054000.1 | Wheat | cytosol | 26.53 | 27.21 |
| TraesCS5B01G221700.1 | Wheat | cytosol | 26.76 | 27.19 |
| TraesCS1B01G005300.1 | Wheat | mitochondrion | 24.49 | 27.14 |
| TraesCS5B01G461000.1 | Wheat | peroxisome | 27.44 | 26.71 |
| TraesCS6B01G030300.1 | Wheat | peroxisome | 26.53 | 26.65 |
| TraesCS3B01G574700.1 | Wheat | peroxisome | 26.3 | 26.54 |
| TraesCS6B01G017400.1 | Wheat | cytosol | 26.08 | 26.44 |
| TraesCS3B01G545700.1 | Wheat | cytosol, peroxisome, plastid | 25.85 | 25.97 |
| TraesCS3B01G486400.1 | Wheat | cytosol | 24.94 | 25.35 |
| TraesCS5B01G038600.1 | Wheat | cytosol | 25.17 | 24.94 |
| TraesCS3B01G488100.1 | Wheat | peroxisome | 24.26 | 24.71 |
| TraesCS3B01G485500.1 | Wheat | cytosol | 24.26 | 24.37 |
| TraesCS6B01G288300.1 | Wheat | peroxisome | 23.13 | 23.34 |
| TraesCS3B01G485400.1 | Wheat | plasma membrane | 24.72 | 23.34 |
| TraesCS6B01G030200.1 | Wheat | cytosol | 6.8 | 22.73 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G518300.1 | EnsemblPlantsGene:TraesCS2B01G518300 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF44 |
| PFAM:PF02458 | MapMan:50.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:712889726..712891051
Molecular Weight (calculated)
48193.4 Da
IEP (calculated)
4.979
GRAVY (calculated)
-0.029
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MKITVLSSRP VKPDYGACGV PPGSTADVVP LTVLDKANFD AYISVIYAFR PPAPPNAVLE AGLARALVDY REWAGRLGVD AASGDRAILL SDSGARFVEA
101: TSDVALDSVM PMKPTPEVLS LHPSGDDGPE ELMLIQVTRF ACGSIVVGFT AQHLVSDGRA TSNFFLAWSQ ATRGVAVDPV PVHDRPSFFK PRDPPQVEYE
201: HRGVEFKPYK EADENDDERH IRDGDVVVVN KVHLSLEFIS KLKSRALVGA HRPYSTLRCL VAHLWRCVTK ARGLDGSVST SVAIAVDGRA RMSPQVPDGY
301: TGNVVLWARP TATAQELVTR PLQHAVELIN REVARINGGY FESFIDFASS EAVQKERLVA TADAAEMMLS PNIEVDSWLR IPFYDLDFGG GQPFFFMPSY
401: LPVEGLLILL PSFAGDGSVD AYVPLFSRDM DAFKNCCYNL E
101: TSDVALDSVM PMKPTPEVLS LHPSGDDGPE ELMLIQVTRF ACGSIVVGFT AQHLVSDGRA TSNFFLAWSQ ATRGVAVDPV PVHDRPSFFK PRDPPQVEYE
201: HRGVEFKPYK EADENDDERH IRDGDVVVVN KVHLSLEFIS KLKSRALVGA HRPYSTLRCL VAHLWRCVTK ARGLDGSVST SVAIAVDGRA RMSPQVPDGY
301: TGNVVLWARP TATAQELVTR PLQHAVELIN REVARINGGY FESFIDFASS EAVQKERLVA TADAAEMMLS PNIEVDSWLR IPFYDLDFGG GQPFFFMPSY
401: LPVEGLLILL PSFAGDGSVD AYVPLFSRDM DAFKNCCYNL E
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.