Factsheet for TraesCS3B01G485500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G486400.1	Wheat	cytosol	79.95	80.88
TraesCS3B01G485400.1	Wheat	plasma membrane	82.23	77.3
TraesCS3B01G545700.1	Wheat	cytosol, peroxisome, plastid	73.12	73.12
TraesCS5B01G461000.1	Wheat	peroxisome	69.93	67.77
TraesCS3B01G574700.1	Wheat	peroxisome	63.33	63.62
TraesCS3B01G488100.1	Wheat	peroxisome	62.41	63.28
TraesCS5B01G038600.1	Wheat	cytosol	57.4	56.63
TraesCS6B01G030300.1	Wheat	peroxisome	54.9	54.9
TraesCS6B01G030800.1	Wheat	peroxisome	54.67	54.67
TraesCS6B01G288300.1	Wheat	peroxisome	51.03	51.26
TraesCS6B01G030200.1	Wheat	cytosol	14.12	46.97
TraesCS5B01G221700.1	Wheat	cytosol	43.28	43.78
TraesCS7B01G455100.1	Wheat	cytosol	42.82	43.52
TraesCS5B01G222000.1	Wheat	plastid	40.32	40.41
TraesCS7B01G054000.1	Wheat	cytosol	38.27	39.07
TraesCS7B01G054100.1	Wheat	cytosol	38.04	38.93
TraesCS6B01G017400.1	Wheat	cytosol	37.36	37.7
TraesCS3B01G350400.1	Wheat	peroxisome	37.59	37.41
TraesCS2B01G374600.1	Wheat	mitochondrion	34.85	34.93
TraesCS3B01G002000.1	Wheat	mitochondrion	34.17	34.4
TraesCS6B01G249400.1	Wheat	cytosol, golgi	34.17	34.01
TraesCS1B01G005300.1	Wheat	mitochondrion	27.33	30.15
TraesCS4B01G302100.1	Wheat	cytosol	27.11	27.61
TraesCS4B01G302000.1	Wheat	cytosol, extracellular, peroxisome	26.65	27.15
TraesCS1B01G107500.1	Wheat	cytosol	26.42	26.48
TraesCS4B01G384800.1	Wheat	cytosol	25.97	26.45
TraesCS1B01G107400.1	Wheat	cytosol	26.2	26.26
TraesCS4B01G026800.1	Wheat	cytosol	26.42	26.07
TraesCS1B01G107300.1	Wheat	cytosol	25.74	26.04
TraesCS2B01G519100.1	Wheat	cytosol	25.97	25.91
TraesCS2B01G518900.1	Wheat	cytosol	25.51	25.4
TraesCS6B01G430300.1	Wheat	cytosol	25.74	25.11
TraesCS7B01G410100.1	Wheat	cytosol	24.6	24.55
TraesCS6B01G412900.1	Wheat	peroxisome	24.6	24.49
TraesCS2B01G606400.1	Wheat	cytosol	23.69	24.3
TraesCS2B01G518300.1	Wheat	cytosol	24.37	24.26
TraesCS5B01G336500.1	Wheat	cytosol	23.92	24.19
TraesCS5B01G336300.1	Wheat	cytosol	23.92	24.19
TraesCS5B01G136200.1	Wheat	plastid	23.92	24.08
TraesCS5B01G337000.1	Wheat	cytosol	24.15	24.04
TraesCS5B01G336600.1	Wheat	cytosol	23.69	23.96
TraesCS2B01G604000.1	Wheat	cytosol	24.15	23.93
TraesCS4B01G302300.1	Wheat	cytosol	23.23	23.78
TraesCS5B01G336700.1	Wheat	cytosol	23.46	23.73
TraesCS5B01G337100.1	Wheat	cytosol	23.46	23.36
TraesCS5B01G304300.1	Wheat	cytosol	23.01	23.17
TraesCS4B01G302200.1	Wheat	mitochondrion, peroxisome	22.55	22.86
TraesCS2B01G604100.1	Wheat	peroxisome	22.32	21.78
TraesCS6B01G322500.1	Wheat	cytosol	22.1	21.7
TraesCS3B01G234500.1	Wheat	cytosol	19.13	19.95

Protein Annotations

EnsemblPlants:TraesCS3B01G485500.1	EnsemblPlantsGene:TraesCS3B01G485500	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr3B:+:732155722..732157041

Molecular Weight (calculated)

47166.1 Da

IEP (calculated)

7.028

GRAVY (calculated)

0.205

Length

439 amino acids

Sequence
(BLAST)

001: MGVSREVEVV ESCMVTPIEQ TPSHGLWLSP IDLAIVSRGL IPTVYFYSSS SSSGVVDDFF DVTRLKLALA KALVAFYPLA GRLSVHGDGR AEIDCAGQGV
101: LFAVARSDLA VADLVDSQPS PELRRLFAPR VEDLPSIMCA IQVTFMGCGG VVLGTALHHA AVDAPSVFHF FRTWSAFSRD RDGHVAGPGG AALELPCHDR
201: TLLRARTPPM VHPDAFTVFC PKLSLSETSG IGPIVSEIFA VSKDQVAALK RACTSRGDGG RVSTFVAVSA HVWRSMCAAR RLPPDATTRL TFPANVRRVL
301: RPPLPACYFG NAIITLGTAG KVRDIGSEEL ASVAGRINGV VRRMDDELVR SAIDYLEMNG GKQPAGTLPE TELRVFSWLG MPMYDADFGW GKPLATHRAL
401: EERGAIVYLM DGLGGGVRIL VSAEAAVLND FQRLLYAII

Best Arabidopsis Sequence Match ( AT1G27620.1 )
(BLAST)

001: MQELPDCLYE ENQPTLITPL SPTPNHSLYL SNLDDHHFLR FSIKYLYLFQ KSISPLTLKD SLSRVLVDYY PFAGRIRVSD EGSKLEVDCN GEGAVFAEAF
101: MDITCQDFVQ LSPKPNKSWR KLLFKVQAQS FLDIPPLVIQ VTYLRCGGMI LCTAINHCLC DGIGTSQFLH AWAHATTSQA HLPTRPFHSR HVLDPRNPPR
201: VTHSHPGFTR TTTVDKSSTF DISKYLQSQP LAPATLTFNQ SHLLRLKKTC APSLKCTTFE ALAANTWRSW AQSLDLPMTM LVKLLFSVNM RKRLTPELPQ
301: GYYGNGFVLA CAESKVQDLV NGNIYHAVKS IQEAKSRITD EYVRSTIDLL EDKTVKTDVS CSLVISQWAK LGLEELDLGG GKPMYMGPLT SDIYCLFLPV
401: ASDNDAIRVQ MSLPEEVVKR LEYCMVKFLD GKDNEDENSR AC

Arabidopsis Description

At1g27620 [Source:UniProtKB/TrEMBL;Acc:Q9S808]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.