Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G054000.1 | Wheat | cytosol | 80.69 | 81.63 |
| Os06t0185500-00 | Rice | cytosol | 75.63 | 75.98 |
| TraesCS7B01G054100.1 | Wheat | cytosol | 74.02 | 75.06 |
| TraesCS3B01G350400.1 | Wheat | peroxisome | 72.64 | 71.66 |
| Os06t0185300-01 | Rice | cytosol | 50.11 | 68.34 |
| TraesCS5B01G222000.1 | Wheat | plastid | 52.18 | 51.83 |
| TraesCS7B01G455100.1 | Wheat | cytosol | 39.08 | 39.35 |
| TraesCS5B01G221700.1 | Wheat | cytosol | 38.16 | 38.25 |
| TraesCS3B01G486400.1 | Wheat | cytosol | 37.93 | 38.02 |
| TraesCS5B01G461000.1 | Wheat | peroxisome | 39.31 | 37.75 |
| TraesCS3B01G485500.1 | Wheat | cytosol | 37.7 | 37.36 |
| TraesCS6B01G288300.1 | Wheat | peroxisome | 37.01 | 36.84 |
| TraesCS3B01G545700.1 | Wheat | cytosol, peroxisome, plastid | 37.01 | 36.67 |
| TraesCS3B01G574700.1 | Wheat | peroxisome | 36.78 | 36.61 |
| TraesCS3B01G488100.1 | Wheat | peroxisome | 35.86 | 36.03 |
| TraesCS2B01G374600.1 | Wheat | mitochondrion | 36.09 | 35.84 |
| TraesCS3B01G002000.1 | Wheat | mitochondrion | 35.86 | 35.78 |
| TraesCS6B01G030200.1 | Wheat | cytosol | 10.8 | 35.61 |
| TraesCS6B01G249400.1 | Wheat | cytosol, golgi | 36.09 | 35.6 |
| TraesCS6B01G030800.1 | Wheat | peroxisome | 35.4 | 35.08 |
| TraesCS3B01G485400.1 | Wheat | plasma membrane | 37.01 | 34.48 |
| TraesCS6B01G030300.1 | Wheat | peroxisome | 34.71 | 34.4 |
| TraesCS5B01G038600.1 | Wheat | cytosol | 34.48 | 33.71 |
| TraesCS1B01G005300.1 | Wheat | mitochondrion | 27.36 | 29.9 |
| TraesCS4B01G302000.1 | Wheat | cytosol, extracellular, peroxisome | 26.44 | 26.68 |
| TraesCS4B01G302200.1 | Wheat | mitochondrion, peroxisome | 25.98 | 26.1 |
| TraesCS2B01G518300.1 | Wheat | cytosol | 26.44 | 26.08 |
| TraesCS2B01G606400.1 | Wheat | cytosol | 25.29 | 25.7 |
| TraesCS4B01G384800.1 | Wheat | cytosol | 25.29 | 25.52 |
| TraesCS4B01G302100.1 | Wheat | cytosol | 25.06 | 25.29 |
| TraesCS1B01G107400.1 | Wheat | cytosol | 25.06 | 24.89 |
| TraesCS1B01G107500.1 | Wheat | cytosol | 25.06 | 24.89 |
| TraesCS5B01G136200.1 | Wheat | plastid | 24.83 | 24.77 |
| TraesCS4B01G026800.1 | Wheat | cytosol | 25.29 | 24.72 |
| TraesCS2B01G518900.1 | Wheat | cytosol | 25.06 | 24.72 |
| TraesCS7B01G410100.1 | Wheat | cytosol | 24.83 | 24.55 |
| TraesCS6B01G430300.1 | Wheat | cytosol | 25.29 | 24.44 |
| TraesCS1B01G107300.1 | Wheat | cytosol | 24.37 | 24.42 |
| TraesCS2B01G519100.1 | Wheat | cytosol | 24.6 | 24.32 |
| TraesCS6B01G412900.1 | Wheat | peroxisome | 24.6 | 24.26 |
| TraesCS5B01G336600.1 | Wheat | cytosol | 23.68 | 23.73 |
| TraesCS5B01G336500.1 | Wheat | cytosol | 23.45 | 23.5 |
| TraesCS5B01G336300.1 | Wheat | cytosol | 23.45 | 23.5 |
| TraesCS6B01G322500.1 | Wheat | cytosol | 24.14 | 23.49 |
| TraesCS5B01G304300.1 | Wheat | cytosol | 23.45 | 23.39 |
| TraesCS5B01G336700.1 | Wheat | cytosol | 22.99 | 23.04 |
| TraesCS2B01G604000.1 | Wheat | cytosol | 22.99 | 22.57 |
| TraesCS5B01G337000.1 | Wheat | cytosol | 22.76 | 22.45 |
| TraesCS4B01G302300.1 | Wheat | cytosol | 22.07 | 22.38 |
| TraesCS5B01G337100.1 | Wheat | cytosol | 22.53 | 22.22 |
| TraesCS2B01G604100.1 | Wheat | peroxisome | 21.61 | 20.89 |
| TraesCS3B01G234500.1 | Wheat | cytosol | 18.85 | 19.48 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G017400.1 | EnsemblPlantsGene:TraesCS6B01G017400 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF56 |
| PFAM:PF02458 | SEG:seg | MapMan:50.2.3 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:11173263..11174570
Molecular Weight (calculated)
46626.1 Da
IEP (calculated)
7.033
GRAVY (calculated)
0.144
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVEVLATE VVVPAEATPG GTVWLSNLDL AARRGYTTTV YFYRANGDPP GFFAVEAVKD SLARALVAFY PLAGRLGLDG AGRVQIDCTG EGAVFLTASS
101: GHYTLDDLMK EFVPCGEMRD LFVPPTPSSN PACPLLLAQI TRLRCGGVVL GLALHHSATD ARSAALFVET WASISRRSTM DVLVPPCFDH KLLAARHSRT
201: VLYDHPEYKP EPAAKHTSTV STYASAIITV TKQQVSVLRA RCAGASTFRV LVALVWQTAC RARALPLDAE TRLYSMIDMR ARLVPPLPQG YFGNAVVRTS
301: TAATVGEVVS NTVGHGAWLA RGATNQGGDY ARSLVDYLEG VEDLMNLPRS GISRAHLRAI SWMGMSLNDA DFGHGAPAFM GPALMYYSGF VYVMNAPGKD
401: GALTLALSLE PESMPEFSRL FAQELARLDA CVASS
101: GHYTLDDLMK EFVPCGEMRD LFVPPTPSSN PACPLLLAQI TRLRCGGVVL GLALHHSATD ARSAALFVET WASISRRSTM DVLVPPCFDH KLLAARHSRT
201: VLYDHPEYKP EPAAKHTSTV STYASAIITV TKQQVSVLRA RCAGASTFRV LVALVWQTAC RARALPLDAE TRLYSMIDMR ARLVPPLPQG YFGNAVVRTS
301: TAATVGEVVS NTVGHGAWLA RGATNQGGDY ARSLVDYLEG VEDLMNLPRS GISRAHLRAI SWMGMSLNDA DFGHGAPAFM GPALMYYSGF VYVMNAPGKD
401: GALTLALSLE PESMPEFSRL FAQELARLDA CVASS
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.