Factsheet for TraesCS5B01G038600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G486400.1	Wheat	cytosol	58.2	59.68
TraesCS3B01G485500.1	Wheat	cytosol	56.63	57.4
TraesCS5B01G461000.1	Wheat	peroxisome	58.43	57.4
TraesCS3B01G545700.1	Wheat	cytosol, peroxisome, plastid	56.18	56.95
TraesCS3B01G488100.1	Wheat	peroxisome	53.93	55.43
TraesCS3B01G574700.1	Wheat	peroxisome	53.48	54.46
TraesCS6B01G288300.1	Wheat	peroxisome	51.69	52.63
TraesCS6B01G030300.1	Wheat	peroxisome	50.79	51.48
TraesCS6B01G030800.1	Wheat	peroxisome	50.34	51.03
TraesCS3B01G485400.1	Wheat	plasma membrane	53.26	50.75
TraesCS6B01G030200.1	Wheat	cytosol	14.38	48.48
TraesCS5B01G221700.1	Wheat	cytosol	41.35	42.4
TraesCS5B01G222000.1	Wheat	plastid	39.78	40.41
TraesCS7B01G455100.1	Wheat	cytosol	38.88	40.05
TraesCS7B01G054100.1	Wheat	cytosol	36.4	37.76
TraesCS7B01G054000.1	Wheat	cytosol	35.28	36.51
TraesCS3B01G350400.1	Wheat	peroxisome	35.06	35.37
TraesCS6B01G017400.1	Wheat	cytosol	33.71	34.48
TraesCS6B01G249400.1	Wheat	cytosol, golgi	33.93	34.24
TraesCS3B01G002000.1	Wheat	mitochondrion	32.81	33.49
TraesCS2B01G374600.1	Wheat	mitochondrion	32.81	33.33
TraesCS1B01G005300.1	Wheat	mitochondrion	26.29	29.4
TraesCS1B01G107500.1	Wheat	cytosol	25.62	26.03
TraesCS6B01G412900.1	Wheat	peroxisome	25.62	25.85
TraesCS1B01G107400.1	Wheat	cytosol	25.39	25.8
TraesCS6B01G430300.1	Wheat	cytosol	26.07	25.78
TraesCS4B01G302100.1	Wheat	cytosol	24.94	25.75
TraesCS2B01G604000.1	Wheat	cytosol	25.62	25.73
TraesCS1B01G107300.1	Wheat	cytosol	24.94	25.58
TraesCS2B01G518300.1	Wheat	cytosol	24.94	25.17
TraesCS4B01G026800.1	Wheat	cytosol	25.17	25.17
TraesCS5B01G336300.1	Wheat	cytosol	24.27	24.88
TraesCS2B01G519100.1	Wheat	cytosol	24.49	24.77
TraesCS5B01G337000.1	Wheat	cytosol	24.49	24.72
TraesCS5B01G336500.1	Wheat	cytosol	24.04	24.65
TraesCS4B01G302000.1	Wheat	cytosol, extracellular, peroxisome	23.82	24.59
TraesCS5B01G336600.1	Wheat	cytosol	23.82	24.42
TraesCS4B01G384800.1	Wheat	cytosol	23.6	24.36
TraesCS7B01G410100.1	Wheat	cytosol	24.04	24.32
TraesCS2B01G518900.1	Wheat	cytosol	23.82	24.04
TraesCS5B01G336700.1	Wheat	cytosol	23.37	23.96
TraesCS5B01G304300.1	Wheat	cytosol	23.37	23.85
TraesCS5B01G337100.1	Wheat	cytosol	23.6	23.81
TraesCS2B01G606400.1	Wheat	cytosol	22.7	23.6
TraesCS4B01G302200.1	Wheat	mitochondrion, peroxisome	22.92	23.56
TraesCS6B01G322500.1	Wheat	cytosol	23.15	23.04
TraesCS4B01G302300.1	Wheat	cytosol	21.57	22.38
TraesCS5B01G136200.1	Wheat	plastid	21.8	22.25
TraesCS2B01G604100.1	Wheat	peroxisome	22.02	21.78
TraesCS3B01G234500.1	Wheat	cytosol	17.53	18.53

Protein Annotations

EnsemblPlants:TraesCS5B01G038600.1	EnsemblPlantsGene:TraesCS5B01G038600	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr5B:+:43860121..43861458

Molecular Weight (calculated)

48547.3 Da

IEP (calculated)

6.425

GRAVY (calculated)

-0.034

Length

445 amino acids

Sequence
(BLAST)

001: MGVEEEEEVR VVESSLVAAS DETPPKSLWL SQLDLKATRR HTPLLWFYRS GDGVQATDGF FNVTRLKAAL AKALVTFYPL AGRIGDDGDG RAEVNCGNQG
101: VLFVVARSED LTVADFHGRP SSKLRRLFVP RMEPPSIVCG VQLTFFKCGG VAIGLAVHHF VVDGSSTSHF TRTWAAISRT GDMSAVEAEP PCHDRFLLRP
201: RSPPAVHPDA LSVFCPMVNL CESSGVPLRS EAFLVSKDQL EALKQACGGR AVSTFCALTA HIWKCVSATR PMPPDATTRL TFPVSIRRKL APPLPTGYFG
301: NAVIRVGVTS EVRGIVSEEL SSVASRIKGT IGRVDDELVW SAIDYFELAE RDSRPAQGSL PTTELRVVSW LGMPIYDTDF GWGKPVMMMR AESERGGRVY
401: MMDGDGDGDG DGGSVRIIVC LEATIIKDFH DMLYAKFSDL IRSSL

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.