Factsheet for TraesCS6B01G030800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G030300.1	Wheat	peroxisome	92.03	92.03
TraesCS6D01G025800.1	Wheat	peroxisome	89.98	90.18
TraesCSU01G078900.1	Wheat	peroxisome	89.75	89.75
TraesCSU01G217900.1	Wheat	peroxisome	68.79	89.35
HORVU6Hr1G012740.1	Barley	peroxisome	69.7	69.86
TraesCS6B01G030200.1	Wheat	cytosol	18.91	62.88
TraesCS3B01G486400.1	Wheat	cytosol	54.44	55.07
TraesCS3B01G485500.1	Wheat	cytosol	54.67	54.67
TraesCS5B01G461000.1	Wheat	peroxisome	55.58	53.86
TraesCS3B01G545700.1	Wheat	cytosol, peroxisome, plastid	52.62	52.62
TraesCS3B01G574700.1	Wheat	peroxisome	52.16	52.4
TraesCS3B01G488100.1	Wheat	peroxisome	51.03	51.73
TraesCS5B01G038600.1	Wheat	cytosol	51.03	50.34
TraesCS3B01G485400.1	Wheat	plasma membrane	50.8	47.75
TraesCS6B01G288300.1	Wheat	peroxisome	46.92	47.14
TraesCS5B01G221700.1	Wheat	cytosol	41.0	41.47
TraesCS7B01G455100.1	Wheat	cytosol	40.32	40.97
TraesCS5B01G222000.1	Wheat	plastid	38.72	38.81
TraesCS7B01G054000.1	Wheat	cytosol	35.54	36.28
TraesCS7B01G054100.1	Wheat	cytosol	34.85	35.66
TraesCS6B01G017400.1	Wheat	cytosol	35.08	35.4
TraesCS2B01G374600.1	Wheat	mitochondrion	34.4	34.47
TraesCS3B01G350400.1	Wheat	peroxisome	34.62	34.47
TraesCS3B01G002000.1	Wheat	mitochondrion	34.17	34.4
TraesCS6B01G249400.1	Wheat	cytosol, golgi	33.94	33.79
TraesCS1B01G005300.1	Wheat	mitochondrion	26.88	29.65
TraesCS2B01G519100.1	Wheat	cytosol	27.56	27.5
TraesCS2B01G518300.1	Wheat	cytosol	27.33	27.21
TraesCS2B01G518900.1	Wheat	cytosol	26.65	26.53
TraesCS4B01G026800.1	Wheat	cytosol	26.65	26.29
TraesCS6B01G430300.1	Wheat	cytosol	26.88	26.22
TraesCS6B01G412900.1	Wheat	peroxisome	26.2	26.08
TraesCS7B01G410100.1	Wheat	cytosol	25.97	25.91
TraesCS1B01G107500.1	Wheat	cytosol	24.83	24.89
TraesCS4B01G302100.1	Wheat	cytosol	24.37	24.83
TraesCS1B01G107400.1	Wheat	cytosol	24.37	24.43
TraesCS1B01G107300.1	Wheat	cytosol	23.92	24.19
TraesCS4B01G302000.1	Wheat	cytosol, extracellular, peroxisome	23.69	24.13
TraesCS5B01G337000.1	Wheat	cytosol	24.15	24.04
TraesCS4B01G302200.1	Wheat	mitochondrion, peroxisome	23.46	23.79
TraesCS2B01G604000.1	Wheat	cytosol	23.92	23.7
TraesCS5B01G337100.1	Wheat	cytosol	23.69	23.58
TraesCS4B01G384800.1	Wheat	cytosol	22.78	23.2
TraesCS5B01G304300.1	Wheat	cytosol	23.01	23.17
TraesCS2B01G606400.1	Wheat	cytosol	22.55	23.13
TraesCS5B01G336600.1	Wheat	cytosol	22.55	22.81
TraesCS6B01G322500.1	Wheat	cytosol	23.01	22.6
TraesCS5B01G336700.1	Wheat	cytosol	22.32	22.58
TraesCS5B01G336500.1	Wheat	cytosol	22.32	22.58
TraesCS5B01G336300.1	Wheat	cytosol	22.32	22.58
TraesCS5B01G136200.1	Wheat	plastid	22.1	22.25
TraesCS4B01G302300.1	Wheat	cytosol	21.41	21.91
TraesCS2B01G604100.1	Wheat	peroxisome	22.32	21.78
TraesCS3B01G234500.1	Wheat	cytosol	18.45	19.24

Protein Annotations

EnsemblPlants:TraesCS6B01G030800.1	EnsemblPlantsGene:TraesCS6B01G030800	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	SEG:seg	MapMan:50.2.3	:	:	:

Description

No Description!

Coordinates

chr6B:-:18298451..18299906

Molecular Weight (calculated)

48673.8 Da

IEP (calculated)

9.130

GRAVY (calculated)

-0.063

Length

439 amino acids

Sequence
(BLAST)

001: MAGEEEVQVV ESCFVTPAVD TPSRAIRLSP FDLMLASRGY TPLVHFYRRP ETSGDDFFNV SRLKTALGKA LVPFYPLAGR LRAGGDGRLE IDCNGKGMLF
101: LVAQSRLTMD DFTDFKPSSK QRRLFVPHVS DSDGLLWATQ VTFLKCGGVV LGSAIHHAAM DGSVVFHFFR TWSAFSRNGD RAMVNLPYHD RSRLCARDPP
201: VVHPDALSIF SPKINLTPQP GPVVNVVVSF TLAKDQLSTL KRISGGDGVS TFSAMSAHLW QCMCLARQLP PDATTQLMFS ANIRRIMRPP LPGGYFGNAI
301: INLSVGDKAY AIASRELSYI ARRIQDIHRR VNDDLVHSAI DYLELAKRDD ERPAIGNLPV TDIRVVSWLG MPSYDADFSW GRPLAMFHAE PNRGGFVHLI
401: DSPQGDGSVR IIMSIEAAIL SELKRLLYAK LNNKLYSKF

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.