Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G217900.1 | Wheat | peroxisome | 76.99 | 100.0 |
| TraesCS6B01G030300.1 | Wheat | peroxisome | 92.03 | 92.03 |
| TraesCS6D01G025800.1 | Wheat | peroxisome | 91.12 | 91.32 |
| TraesCS6B01G030800.1 | Wheat | peroxisome | 89.75 | 89.75 |
| TraesCSU01G078600.1 | Wheat | peroxisome | 87.7 | 87.7 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 71.07 | 71.23 |
| TraesCSU01G220000.1 | Wheat | cytosol | 43.28 | 70.63 |
| TraesCSU01G078700.1 | Wheat | cytosol | 22.78 | 68.49 |
| TraesCSU01G079000.1 | Wheat | peroxisome | 71.75 | 68.48 |
| TraesCSU01G235600.1 | Wheat | cytosol | 67.88 | 67.57 |
| TraesCSU01G148700.1 | Wheat | peroxisome | 68.34 | 64.94 |
| TraesCSU01G078800.1 | Wheat | peroxisome | 52.39 | 64.07 |
| TraesCSU01G244500.1 | Wheat | cytosol | 10.93 | 26.37 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 8.2 | 23.08 |
| TraesCSU01G038200.1 | Wheat | peroxisome | 23.23 | 22.72 |
Protein Annotations
| EnsemblPlants:TraesCSU01G078900.1 | EnsemblPlantsGene:TraesCSU01G078900 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | SUPFAM:SSF52777 | MapMan:50.2.3 | : | : | : |
Description
No Description!
Coordinates
chrUn:+:71219485..71220945
Molecular Weight (calculated)
48690.5 Da
IEP (calculated)
7.414
GRAVY (calculated)
-0.080
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEEEVQVV ESCFVTPAAD TPSRALRLSP FDLMLASRGY TPLVHFYRRP ETAGDDFFDV TRLKTALSKA LVPFYPLAGR LRAGADGTLE IDCNGKGTLF
101: LMAHSRLTMD DFSDFKPSTK QRRLFVPHVS DSDDLLWATQ VTFLKWGGVV LGSAIHHAAM DGSAVFHFLR TWSAFSRDGD RAMVNLPCHD RSRLCARDPP
201: VVHPDALSIF SPKINLPPQP GPLVNEVVAF TLGKDQLSTL KHISGGDSVS TFSAVSAHLW QCMCLARQLP PDAATQLMFS ANVRRIMRPP LPDGYFGNAI
301: INLSVGDNVH AITSRELSYI AQRIRDTHRR VNDELVHSAI DYLELAKRDD ERPATGNLPV TVIRVVSWLG MPSYDADFSW GRPLAMFRAE PNRGGFVHLI
401: DSAQGDGSVR IIMSIEAAIL SELKRLLYAK FDNMLYSKF
101: LMAHSRLTMD DFSDFKPSTK QRRLFVPHVS DSDDLLWATQ VTFLKWGGVV LGSAIHHAAM DGSAVFHFLR TWSAFSRDGD RAMVNLPCHD RSRLCARDPP
201: VVHPDALSIF SPKINLPPQP GPLVNEVVAF TLGKDQLSTL KHISGGDSVS TFSAVSAHLW QCMCLARQLP PDAATQLMFS ANVRRIMRPP LPDGYFGNAI
301: INLSVGDNVH AITSRELSYI AQRIRDTHRR VNDELVHSAI DYLELAKRDD ERPATGNLPV TVIRVVSWLG MPSYDADFSW GRPLAMFRAE PNRGGFVHLI
401: DSAQGDGSVR IIMSIEAAIL SELKRLLYAK FDNMLYSKF
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.