Factsheet for TraesCS6D01G025800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G030300.1	Wheat	peroxisome	92.01	91.8
TraesCSU01G078900.1	Wheat	peroxisome	91.32	91.12
TraesCSU01G217900.1	Wheat	peroxisome	70.09	90.83
TraesCS6B01G030800.1	Wheat	peroxisome	90.18	89.98
HORVU6Hr1G012740.1	Barley	peroxisome	71.92	71.92
TraesCS7D01G015400.1	Wheat	peroxisome	67.81	66.74
TraesCS5D01G462600.1	Wheat	peroxisome	57.31	55.9
TraesCS3D01G492400.1	Wheat	cytosol	54.79	55.05
TraesCS7D01G436700.1	Wheat	peroxisome	52.28	53.63
TraesCS3D01G514600.1	Wheat	peroxisome	54.57	53.59
TraesCS3D01G441400.1	Wheat	cytosol, plasma membrane, plastid	24.43	50.0
TraesCS6D01G241700.1	Wheat	cytosol	46.8	46.8
TraesCS5D01G230500.1	Wheat	cytosol	40.64	41.3
TraesCS7D01G524200.1	Wheat	cytosol	41.1	41.28
TraesCS5D01G230700.1	Wheat	plastid	38.13	38.13
TraesCS7D01G151400.1	Wheat	cytosol	35.62	36.28
TraesCS7D01G151800.1	Wheat	cytosol	35.16	35.73
TraesCS7D01G151900.1	Wheat	cytosol	34.47	35.2
TraesCS2D01G354300.1	Wheat	mitochondrion	34.93	34.93
TraesCS3D01G314900.1	Wheat	peroxisome	35.16	34.92
TraesCS6D01G203000.1	Wheat	cytosol	34.02	33.71
TraesCS3D01G525000.1	Wheat	mitochondrion	33.79	33.48
TraesCS1D01G021600.1	Wheat	mitochondrion	33.33	33.11
TraesCS4D01G024500.1	Wheat	cytosol	27.4	26.85
TraesCS2D01G490400.1	Wheat	cytosol	26.94	26.76
TraesCS2D01G491100.1	Wheat	cytosol	26.94	26.76
TraesCS2D01G490900.1	Wheat	cytosol	26.48	26.3
TraesCS6D01G359800.1	Wheat	peroxisome	25.34	25.23
TraesCS1D01G089900.1	Wheat	cytosol	25.11	25.11
TraesCS1D01G089600.1	Wheat	cytosol	24.89	24.89
TraesCS4D01G300400.1	Wheat	cytosol, extracellular, peroxisome	24.2	24.59
TraesCS2D01G582000.1	Wheat	cytosol	24.43	24.32
TraesCS4D01G359800.1	Wheat	cytosol	23.74	24.13
TraesCS4D01G300800.1	Wheat	cytosol, extracellular, peroxisome	24.2	24.09
TraesCS2D01G568200.1	Wheat	mitochondrion	23.52	23.95
TraesCS5D01G342700.1	Wheat	cytosol	23.74	23.58
TraesCS2D01G581500.1	Wheat	cytosol	23.52	23.46
TraesCS4D01G300500.1	Wheat	peroxisome	23.97	23.28
TraesCS5D01G342800.1	Wheat	cytosol	23.06	23.01
TraesCS5D01G310800.1	Wheat	cytosol	22.15	22.25
TraesCS5D01G342400.1	Wheat	cytosol, golgi, plastid	21.92	22.12
TraesCS5D01G154500.1	Wheat	plastid	22.6	22.0
TraesCS5D01G342300.1	Wheat	cytosol	21.69	21.89
TraesCS5D01G342100.1	Wheat	cytosol	21.69	21.89
TraesCS6D01G273300.1	Wheat	cytosol	21.69	21.44
TraesCS2D01G016600.1	Wheat	cytosol	21.92	20.56
TraesCS3D01G545300.1	Wheat	cytosol	21.0	20.4

Protein Annotations

EnsemblPlants:TraesCS6D01G025800.1	EnsemblPlantsGene:TraesCS6D01G025800	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	MapMan:50.2.3	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:9906571..9908011

Molecular Weight (calculated)

48517.3 Da

IEP (calculated)

8.582

GRAVY (calculated)

-0.122

Length

438 amino acids

Sequence
(BLAST)

001: MAGEEEAQVM ESCFVTPAAD TPTRAIRLSP FDLMLANRGY TPLVHFYRRP ETAGDDFFDV TRLKTALGKA LVPFYPLAGR LRAGADGRLE IDCNGKGMLF
101: LVAHSRLTVD DFSDFKPSSK QRRLFVPHAN HSDSLLWTTQ VTFLKCGGVV LGSAIHHAAM DGSVVFHFFR TWSAFSRDGD RAMVNLPCHD RTRLSARDPP
201: VVHPDGLAVF SPKINLPPQP GPVVNEVVGF TLAKDQLSTL KHISGGDGVS TFSAVSAHLW QCMCLARNLP PDATTQLMFS ANVRRIMRPP LPDGYFGNAI
301: INLSVGDKAH AIASRELSYI ARRIRDTHRR VNDELVHSAI DYLELAKRDD ERPATGNLPV TDIRVVSWLG MPSYDADFSW GRPLAMFRAE PNRGGFVHLI
401: DSAQGDGSGR IIMSIEAAIL SEFKRLLYAK FNMLYSKF

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.