Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G518900.1 | Wheat | cytosol | 95.92 | 95.92 |
| TraesCS2D01G491100.1 | Wheat | cytosol | 95.46 | 95.46 |
| HORVU2Hr1G109590.1 | Barley | cytosol | 68.25 | 93.19 |
| HORVU3Hr1G027720.1 | Barley | cytosol | 26.08 | 92.0 |
| TraesCS2D01G490400.1 | Wheat | cytosol | 81.86 | 81.86 |
| Os04t0664500-01 | Rice | cytosol | 22.22 | 78.4 |
| HORVU2Hr1G109470.1 | Barley | cytosol | 34.01 | 75.76 |
| Os04t0664600-00 | Rice | cytosol | 75.74 | 74.39 |
| TraesCS6D01G359800.1 | Wheat | peroxisome | 64.63 | 64.77 |
| PGSC0003DMT400018441 | Potato | cytosol | 51.7 | 51.24 |
| Solyc06g074710.1.1 | Tomato | cytosol | 51.47 | 51.13 |
| Solyc11g066640.1.1 | Tomato | cytosol | 50.79 | 51.03 |
| PGSC0003DMT400001145 | Potato | cytosol | 50.57 | 50.57 |
| TraesCS4D01G024500.1 | Wheat | cytosol | 51.25 | 50.56 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 44.22 | 50.52 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 42.86 | 50.27 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 38.78 | 49.28 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 38.55 | 49.28 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 39.23 | 49.15 |
| TraesCS5D01G310800.1 | Wheat | cytosol | 48.3 | 48.85 |
| TraesCS5D01G342100.1 | Wheat | cytosol | 48.07 | 48.85 |
| TraesCS5D01G342700.1 | Wheat | cytosol | 48.75 | 48.75 |
| TraesCS5D01G342800.1 | Wheat | cytosol | 48.53 | 48.75 |
| TraesCS5D01G342400.1 | Wheat | cytosol, golgi, plastid | 47.39 | 48.16 |
| TraesCS5D01G342300.1 | Wheat | cytosol | 47.17 | 47.93 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 44.44 | 47.92 |
| Solyc11g071470.1.1 | Tomato | cytosol | 47.62 | 47.4 |
| Solyc11g071480.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 46.71 | 46.5 |
| TraesCS2D01G016600.1 | Wheat | cytosol | 45.35 | 42.83 |
| TraesCS3D01G545300.1 | Wheat | cytosol | 42.4 | 41.46 |
| PGSC0003DMT400048126 | Potato | cytosol | 40.82 | 39.91 |
| TraesCS4D01G300400.1 | Wheat | cytosol, extracellular, peroxisome | 36.05 | 36.89 |
| PGSC0003DMT400048130 | Potato | cytoskeleton, cytosol, peroxisome | 47.39 | 36.73 |
| TraesCS1D01G089600.1 | Wheat | cytosol | 36.28 | 36.53 |
| TraesCS1D01G089900.1 | Wheat | cytosol | 36.05 | 36.3 |
| TraesCS4D01G359800.1 | Wheat | cytosol | 34.92 | 35.73 |
| TraesCS4D01G300800.1 | Wheat | cytosol, extracellular, peroxisome | 35.15 | 35.23 |
| TraesCS2D01G581500.1 | Wheat | cytosol | 34.69 | 34.85 |
| TraesCS2D01G568200.1 | Wheat | mitochondrion | 33.56 | 34.42 |
| TraesCS2D01G582000.1 | Wheat | cytosol | 34.24 | 34.32 |
| TraesCS4D01G300500.1 | Wheat | peroxisome | 34.47 | 33.7 |
| TraesCS6D01G273300.1 | Wheat | cytosol | 33.56 | 33.41 |
| TraesCS5D01G154500.1 | Wheat | plastid | 33.33 | 32.67 |
| TraesCS3D01G525000.1 | Wheat | mitochondrion | 30.61 | 30.54 |
| TraesCS2D01G354300.1 | Wheat | mitochondrion | 29.93 | 30.14 |
| TraesCS6D01G203000.1 | Wheat | cytosol | 30.16 | 30.09 |
| TraesCS1D01G021600.1 | Wheat | mitochondrion | 29.71 | 29.71 |
| Bra024450.1-P | Field mustard | cytosol | 24.72 | 28.68 |
| CDY56515 | Canola | cytosol | 24.72 | 28.68 |
| CDY62143 | Canola | cytosol | 24.72 | 28.68 |
| KRH02826 | Soybean | cytosol | 29.25 | 28.35 |
| TraesCS5D01G230700.1 | Wheat | plastid | 27.89 | 28.08 |
| TraesCS5D01G230500.1 | Wheat | cytosol | 27.21 | 27.84 |
| VIT_11s0103g00200.t01 | Wine grape | cytosol | 28.57 | 27.63 |
| KRH02825 | Soybean | cytosol | 28.8 | 27.61 |
| TraesCS7D01G151900.1 | Wheat | cytosol | 26.76 | 27.51 |
| TraesCS7D01G524200.1 | Wheat | cytosol | 26.98 | 27.29 |
| TraesCS7D01G436700.1 | Wheat | peroxisome | 26.3 | 27.17 |
| TraesCS3D01G514600.1 | Wheat | peroxisome | 27.44 | 27.13 |
| TraesCS3D01G441400.1 | Wheat | cytosol, plasma membrane, plastid | 13.15 | 27.1 |
| TraesCS7D01G151400.1 | Wheat | cytosol | 26.3 | 26.98 |
| TraesCS3D01G492400.1 | Wheat | cytosol | 26.53 | 26.83 |
| TraesCS7D01G151800.1 | Wheat | cytosol | 26.08 | 26.68 |
| TraesCS6D01G025800.1 | Wheat | peroxisome | 26.3 | 26.48 |
| AT2G19070.1 | Thale cress | cytosol | 26.98 | 26.39 |
| TraesCS3D01G314900.1 | Wheat | peroxisome | 26.3 | 26.3 |
| TraesCS5D01G462600.1 | Wheat | peroxisome | 26.53 | 26.06 |
| KRH46099 | Soybean | cytosol, plastid | 26.3 | 25.66 |
| CDY66506 | Canola | cytosol | 25.62 | 25.57 |
| VIT_11s0037g00570.t01 | Wine grape | mitochondrion | 25.62 | 25.39 |
| TraesCS7D01G015400.1 | Wheat | peroxisome | 25.4 | 25.17 |
| KRG98872 | Soybean | cytosol, peroxisome, plastid | 26.53 | 25.11 |
| CDY03367 | Canola | cytosol | 25.62 | 25.06 |
| Bra038561.1-P | Field mustard | cytosol | 25.62 | 25.06 |
| VIT_11s0037g00580.t01 | Wine grape | mitochondrion | 25.62 | 24.73 |
| KRG89744 | Soybean | cytosol | 25.85 | 24.57 |
| KRG98866 | Soybean | cytosol | 24.94 | 24.44 |
| KRH32575 | Soybean | cytosol | 24.72 | 24.33 |
| KRH32581 | Soybean | cytosol | 23.58 | 24.19 |
| TraesCS6D01G241700.1 | Wheat | cytosol | 23.81 | 23.97 |
| KRH08423 | Soybean | cytosol | 24.26 | 23.94 |
| KRG98873 | Soybean | mitochondrion | 24.72 | 23.59 |
| KRG98999 | Soybean | mitochondrion, peroxisome, plastid | 25.62 | 23.54 |
| KRH46095 | Soybean | plastid | 25.17 | 23.32 |
| KRG98867 | Soybean | endoplasmic reticulum | 23.81 | 23.18 |
| KRH53324 | Soybean | cytosol | 12.7 | 23.14 |
| KRH46098 | Soybean | cytosol | 23.81 | 23.03 |
| KRH06686 | Soybean | peroxisome | 24.26 | 23.01 |
| KRH46094 | Soybean | plastid | 24.26 | 23.01 |
| KRH06685 | Soybean | plastid | 23.81 | 22.88 |
| KRH13469 | Soybean | cytosol | 23.81 | 22.88 |
| KRH70082 | Soybean | cytosol | 13.83 | 22.59 |
| KRG98868 | Soybean | cytosol | 22.22 | 22.58 |
| KRH46097 | Soybean | cytosol | 11.56 | 22.57 |
| KRH30196 | Soybean | cytosol | 24.04 | 22.04 |
| KRH30198 | Soybean | cytosol | 24.04 | 22.04 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G490900.1 | EnsemblPlantsGene:TraesCS2D01G490900 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF44 |
| PFAM:PF02458 | SEG:seg | MapMan:50.2.3 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:589522601..589524227
Molecular Weight (calculated)
48080.2 Da
IEP (calculated)
4.833
GRAVY (calculated)
-0.034
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MKITVHSSKA VKPDYGACGV APASTADVVP LTVLDKANFD TYISVIYAFR ASAPPNAVLE AGLARALVDY REWAGRLGVD PNGERAIMLN DAGARFMEAT
101: ADVALDSVMP LKPTPEVLNL HPSGDDGPEE LMLIQVTRFA CGSLVVGFTT QHIVSDGRST GNFFVAWSQA TRGSAIDPVP VHDRASFFQP REPLHVEYEH
201: RGVEFKPYKK VYDDIVCGDG DDEDDEVVVN KVHFSREFIS RLKAQASAGA PRPCSTLQCV VAHLWRTMTM ARGLDGGEST SVAIAVDGRA RMSPQVPDGY
301: TGNVILWARP TTTAGELVAR PVKHAVELIS REVARINDGY FKSFIDFANS GAVEKERLLA TADAAEMVLS PNIEVDSWLR IPFYDMDFGG GRPFFFMPSY
401: LPVEGLLILL PSFLGDGSVD AYVPLLSRDM NTFKNCCYTL D
101: ADVALDSVMP LKPTPEVLNL HPSGDDGPEE LMLIQVTRFA CGSLVVGFTT QHIVSDGRST GNFFVAWSQA TRGSAIDPVP VHDRASFFQP REPLHVEYEH
201: RGVEFKPYKK VYDDIVCGDG DDEDDEVVVN KVHFSREFIS RLKAQASAGA PRPCSTLQCV VAHLWRTMTM ARGLDGGEST SVAIAVDGRA RMSPQVPDGY
301: TGNVILWARP TTTAGELVAR PVKHAVELIS REVARINDGY FKSFIDFANS GAVEKERLLA TADAAEMVLS PNIEVDSWLR IPFYDMDFGG GRPFFFMPSY
401: LPVEGLLILL PSFLGDGSVD AYVPLLSRDM NTFKNCCYTL D
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.