Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G151400.1 | Wheat | cytosol | 97.68 | 97.91 |
| TraesCS7A01G150000.1 | Wheat | cytosol | 96.06 | 96.06 |
| TraesCS7B01G054000.1 | Wheat | cytosol | 95.13 | 95.35 |
| HORVU7Hr1G030740.3 | Barley | cytosol | 90.02 | 89.61 |
| Os06t0185500-00 | Rice | cytosol | 78.65 | 78.29 |
| TraesCS7D01G151900.1 | Wheat | cytosol | 77.03 | 77.39 |
| TraesCS3D01G314900.1 | Wheat | peroxisome | 76.1 | 74.38 |
| Os06t0185300-01 | Rice | cytosol | 52.67 | 71.16 |
| TraesCS5D01G230700.1 | Wheat | plastid | 55.22 | 54.34 |
| TraesCS7D01G524200.1 | Wheat | cytosol | 42.0 | 41.51 |
| TraesCS6D01G241700.1 | Wheat | cytosol | 40.14 | 39.5 |
| TraesCS3D01G441400.1 | Wheat | cytosol, plasma membrane, plastid | 19.49 | 39.25 |
| TraesCS5D01G230500.1 | Wheat | cytosol | 38.98 | 38.98 |
| TraesCS3D01G492400.1 | Wheat | cytosol | 39.21 | 38.76 |
| TraesCS7D01G436700.1 | Wheat | peroxisome | 38.28 | 38.64 |
| TraesCS3D01G514600.1 | Wheat | peroxisome | 38.98 | 37.67 |
| TraesCS5D01G462600.1 | Wheat | peroxisome | 39.21 | 37.64 |
| TraesCS2D01G354300.1 | Wheat | mitochondrion | 37.82 | 37.21 |
| TraesCS7D01G015400.1 | Wheat | peroxisome | 37.59 | 36.4 |
| TraesCS6D01G203000.1 | Wheat | cytosol | 37.12 | 36.2 |
| TraesCS3D01G525000.1 | Wheat | mitochondrion | 36.89 | 35.97 |
| TraesCS6D01G025800.1 | Wheat | peroxisome | 35.73 | 35.16 |
| TraesCS1D01G021600.1 | Wheat | mitochondrion | 35.27 | 34.47 |
| TraesCS2D01G490400.1 | Wheat | cytosol | 27.61 | 26.98 |
| TraesCS2D01G491100.1 | Wheat | cytosol | 27.38 | 26.76 |
| TraesCS6D01G359800.1 | Wheat | peroxisome | 27.15 | 26.59 |
| TraesCS2D01G490900.1 | Wheat | cytosol | 26.68 | 26.08 |
| TraesCS2D01G568200.1 | Wheat | mitochondrion | 25.99 | 26.05 |
| TraesCS4D01G300400.1 | Wheat | cytosol, extracellular, peroxisome | 25.99 | 25.99 |
| TraesCS4D01G359800.1 | Wheat | cytosol | 25.29 | 25.29 |
| TraesCS4D01G024500.1 | Wheat | cytosol | 26.22 | 25.28 |
| TraesCS4D01G300800.1 | Wheat | cytosol, extracellular, peroxisome | 25.75 | 25.23 |
| TraesCS2D01G581500.1 | Wheat | cytosol | 25.52 | 25.06 |
| TraesCS2D01G582000.1 | Wheat | cytosol | 25.29 | 24.77 |
| TraesCS4D01G300500.1 | Wheat | peroxisome | 25.75 | 24.61 |
| TraesCS1D01G089900.1 | Wheat | cytosol | 24.83 | 24.43 |
| TraesCS1D01G089600.1 | Wheat | cytosol | 24.59 | 24.2 |
| TraesCS5D01G154500.1 | Wheat | plastid | 24.83 | 23.78 |
| TraesCS5D01G342300.1 | Wheat | cytosol | 23.67 | 23.5 |
| TraesCS5D01G342100.1 | Wheat | cytosol | 23.2 | 23.04 |
| TraesCS6D01G273300.1 | Wheat | cytosol | 23.67 | 23.02 |
| TraesCS3D01G545300.1 | Wheat | cytosol | 23.9 | 22.84 |
| TraesCS5D01G342400.1 | Wheat | cytosol, golgi, plastid | 22.74 | 22.58 |
| TraesCS2D01G016600.1 | Wheat | cytosol | 24.36 | 22.48 |
| TraesCS5D01G310800.1 | Wheat | cytosol | 22.74 | 22.48 |
| TraesCS5D01G342700.1 | Wheat | cytosol | 22.97 | 22.45 |
| TraesCS5D01G342800.1 | Wheat | cytosol | 22.51 | 22.1 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G151800.1 | EnsemblPlantsGene:TraesCS7D01G151800 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF56 |
| PFAM:PF02458 | SEG:seg | SUPFAM:SSF52777 | MapMan:50.2.3 | : | : |
Description
No Description!
Coordinates
chr7D:+:100939544..100940839
Molecular Weight (calculated)
46419.7 Da
IEP (calculated)
6.783
GRAVY (calculated)
0.080
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVQVLSTE MVVPAEATPG AAVWLSNLDL AARRGYTPTV YFYRPNGEHA GFFAADAVKD SLARALVAFY PLAGRLGLDG ARRVQIDCTG EGAVFVTARS
101: DHYALEDLMN EFVPCGEMRD LFVPPTPTPN PPCVLLLAQV TYLRCGGVVL GLAMHHSVVD ARSAALFVET WASVARGSTK EDAPVPPSFD HRLLAARQER
201: AVPYDHPEYK PEPAPVHAAT AASTYASALI TVSKQQVSAL RARCAGASTF RAVVALVWQC ACRARGLPLD AETRLYSMID MRPRLAPPLP QGYFGNAVIR
301: TSTVATVGEV VSNPVDYGAR RARAATSQGD DYARSLVDYL DGVDVMNLPR SGISRAHLRA ISWMGMSLSD ADFGWGAPSF MGPALMYYSG FVYVMNAAGK
401: EGALTLALSL EPESMPEFRK VFAHELARLD V
101: DHYALEDLMN EFVPCGEMRD LFVPPTPTPN PPCVLLLAQV TYLRCGGVVL GLAMHHSVVD ARSAALFVET WASVARGSTK EDAPVPPSFD HRLLAARQER
201: AVPYDHPEYK PEPAPVHAAT AASTYASALI TVSKQQVSAL RARCAGASTF RAVVALVWQC ACRARGLPLD AETRLYSMID MRPRLAPPLP QGYFGNAVIR
301: TSTVATVGEV VSNPVDYGAR RARAATSQGD DYARSLVDYL DGVDVMNLPR SGISRAHLRA ISWMGMSLSD ADFGWGAPSF MGPALMYYSG FVYVMNAAGK
401: EGALTLALSL EPESMPEFRK VFAHELARLD V
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.