Factsheet for TraesCS3D01G525000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G517500.1	Wheat	mitochondrion	97.06	96.19
TraesCS3B01G002000.1	Wheat	mitochondrion	94.8	96.1
HORVU1Hr1G081430.3	Barley	cytosol, peroxisome, plastid	76.24	88.45
TraesCS1D01G021600.1	Wheat	mitochondrion	83.94	84.13
TraesCS2D01G354300.1	Wheat	mitochondrion	75.79	76.48
TraesCS6D01G203000.1	Wheat	cytosol	69.68	69.68
GSMUA_Achr4P01990_001	Banana	mitochondrion	62.67	63.53
Bra036480.1-P	Field mustard	cytosol, peroxisome, plastid	57.47	59.91
CDY05770	Canola	cytosol	58.37	59.58
AT5G48930.1	Thale cress	cytosol	58.14	59.35
PGSC0003DMT400036695	Potato	cytosol	57.01	59.15
CDY31956	Canola	cytosol	57.92	59.12
VIT_09s0018g01190.t01	Wine grape	cytosol	56.79	58.51
KRH44584	Soybean	cytosol	56.79	58.51
Solyc03g117600.2.1	Tomato	cytosol, extracellular	57.24	58.16
KRH23680	Soybean	cytosol, nucleus	56.56	56.95
Bra033526.1-P	Field mustard	mitochondrion	54.07	55.84
CDY22880	Canola	mitochondrion	54.07	55.84
KRH09635	Soybean	cytosol	47.06	55.62
CDY44162	Canola	plastid	53.85	55.61
KRH47315	Soybean	endoplasmic reticulum	56.11	53.33
TraesCS3D01G441400.1	Wheat	cytosol, plasma membrane, plastid	18.1	37.38
TraesCS5D01G230700.1	Wheat	plastid	36.88	37.21
TraesCS7D01G151800.1	Wheat	cytosol	35.97	36.89
TraesCS7D01G151400.1	Wheat	cytosol	35.75	36.74
TraesCS5D01G230500.1	Wheat	cytosol	35.29	36.19
TraesCS3D01G514600.1	Wheat	peroxisome	36.43	36.1
TraesCS5D01G462600.1	Wheat	peroxisome	36.65	36.08
TraesCS7D01G524200.1	Wheat	cytosol	35.52	36.01
TraesCS7D01G436700.1	Wheat	peroxisome	34.62	35.83
TraesCS3D01G492400.1	Wheat	cytosol	35.29	35.78
TraesCS7D01G151900.1	Wheat	cytosol	34.39	35.43
TraesCS6D01G241700.1	Wheat	cytosol	34.62	34.93
TraesCS7D01G015400.1	Wheat	peroxisome	34.84	34.61
TraesCS6D01G025800.1	Wheat	peroxisome	33.48	33.79
TraesCS3D01G314900.1	Wheat	peroxisome	33.71	33.79
TraesCS2D01G490400.1	Wheat	cytosol	30.77	30.84
TraesCS2D01G491100.1	Wheat	cytosol	30.77	30.84
TraesCS2D01G490900.1	Wheat	cytosol	30.54	30.61
TraesCS6D01G359800.1	Wheat	peroxisome	29.19	29.32
TraesCS4D01G024500.1	Wheat	cytosol	28.28	27.96
TraesCS2D01G568200.1	Wheat	mitochondrion	25.79	26.51
TraesCS5D01G342100.1	Wheat	cytosol	26.02	26.5
TraesCS5D01G342400.1	Wheat	cytosol, golgi, plastid	26.02	26.5
TraesCS5D01G342300.1	Wheat	cytosol	25.79	26.27
TraesCS4D01G300400.1	Wheat	cytosol, extracellular, peroxisome	25.57	26.22
TraesCS5D01G310800.1	Wheat	cytosol	25.57	25.92
TraesCS1D01G089600.1	Wheat	cytosol	25.57	25.8
TraesCS2D01G581500.1	Wheat	cytosol	25.57	25.74
TraesCS1D01G089900.1	Wheat	cytosol	25.34	25.57
TraesCS5D01G342800.1	Wheat	cytosol	24.89	25.06
TraesCS4D01G300500.1	Wheat	peroxisome	25.57	25.06
TraesCS2D01G582000.1	Wheat	cytosol	24.89	25.0
TraesCS5D01G342700.1	Wheat	cytosol	24.89	24.94
TraesCS2D01G016600.1	Wheat	cytosol	26.02	24.63
TraesCS3D01G545300.1	Wheat	cytosol	25.11	24.61
TraesCS4D01G300800.1	Wheat	cytosol, extracellular, peroxisome	24.21	24.32
TraesCS4D01G359800.1	Wheat	cytosol	23.53	24.13
TraesCS5D01G154500.1	Wheat	plastid	23.98	23.56
TraesCS6D01G273300.1	Wheat	cytosol	22.85	22.8

Protein Annotations

EnsemblPlants:TraesCS3D01G525000.1	EnsemblPlantsGene:TraesCS3D01G525000	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF116
PFAM:PF02458	MapMan:21.6.1.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:604608301..604613323

Molecular Weight (calculated)

48873.9 Da

IEP (calculated)

7.071

GRAVY (calculated)

-0.104

Length

442 amino acids

Sequence
(BLAST)

001: MGITVTVRRA SMVRPAKELP LSRLWNSHLD LLVPRFHTPS VYFYRCPEER APEGFFDADR MRGALADALV TFYPMAGRLA RDKDGRIEID CNGEGVLFVE
101: ADAPDATVAD YGDFAPTMEL KRLIPAVDYT EEISFPLVLL QVTYFKCGGV SLGVATQHHV ADGMSGLHFI NSWSNLCRGA QIAVMPFIDR TLIRARDPPT
201: PCYPHVEYHP SPAMLSSKPQ DLPSNSKRTS PDTAVDIFKL TSSDIGRLRS QLPTGDDMPR LSTYTLLSAH VWRCVSLSRG LPSDQPTKLY CAIDGRKRLK
301: PPLPDGFLGN VLFTATPIVE AGKVTRGLAD AAKIIQMELD RMNDDYCRSA LDYLELQPDL SALVRGAQTY RCPNLGITSW VNLPVHNADF GWGRPMFMGP
401: GGVAFEGLAY VLPSAHNDGS LSIAISLQAD HMKKFRQLIF VL

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.