Factsheet for VIT_09s0018g01190.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44584	Soybean	cytosol	80.19	80.19
AT5G48930.1	Thale cress	cytosol	79.95	79.21
CDY05770	Canola	cytosol	79.49	78.75
Bra036480.1-P	Field mustard	cytosol, peroxisome, plastid	77.62	78.54
CDY31956	Canola	cytosol	79.25	78.52
Solyc03g117600.2.1	Tomato	cytosol, extracellular	78.32	77.24
PGSC0003DMT400036695	Potato	cytosol	76.69	77.23
KRH23680	Soybean	cytosol, nucleus	77.16	75.4
KRH47315	Soybean	endoplasmic reticulum	80.19	73.98
CDY22880	Canola	mitochondrion	71.79	71.96
Bra033526.1-P	Field mustard	mitochondrion	71.56	71.73
CDY44162	Canola	plastid	71.33	71.5
GSMUA_Achr5P04550_001	Banana	cytosol	69.0	70.64
KRH09635	Soybean	cytosol	60.84	69.79
Zm00001d003129_P001	Maize	mitochondrion	23.31	68.03
GSMUA_Achr10P...	Banana	mitochondrion	69.7	67.95
GSMUA_Achr4P01990_001	Banana	mitochondrion	68.76	67.66
EES11073	Sorghum	mitochondrion	66.2	64.4
Os04t0500700-02	Rice	mitochondrion	66.2	64.25
TraesCS2D01G354300.1	Wheat	mitochondrion	64.8	63.47
Zm00001d017186_P001	Maize	extracellular	65.97	63.45
TraesCS2B01G374600.1	Wheat	mitochondrion	64.34	63.01
Os02t0611800-01	Rice	plasma membrane	64.8	62.9
TraesCS2A01G354500.1	Wheat	mitochondrion	64.57	62.67
HORVU6Hr1G056230.2	Barley	cytosol	64.1	62.36
TraesCS6D01G203000.1	Wheat	cytosol	64.1	62.22
TraesCS6B01G249400.1	Wheat	cytosol, golgi	63.87	62.13
EES05411	Sorghum	cytosol	64.8	62.05
TraesCS6A01G232200.1	Wheat	cytosol	63.87	61.99
TraesCS3B01G002000.1	Wheat	mitochondrion	58.51	57.57
TraesCS1D01G021600.1	Wheat	mitochondrion	58.51	56.92
VIT_11s0037g00440.t01	Wine grape	cytosol	57.34	56.81
TraesCS3D01G525000.1	Wheat	mitochondrion	58.51	56.79
TraesCS3A01G517500.1	Wheat	mitochondrion	58.74	56.5
HORVU1Hr1G081430.3	Barley	cytosol, peroxisome, plastid	50.12	56.43
TraesCS1B01G005300.1	Wheat	mitochondrion	46.39	50.0
HORVU2Hr1G086380.1	Barley	cytosol, nucleus, plastid	63.87	47.08
VIT_11s0037g00570.t01	Wine grape	mitochondrion	41.96	40.45
VIT_11s0037g00580.t01	Wine grape	mitochondrion	41.49	38.95
VIT_11s0103g00200.t01	Wine grape	cytosol	41.26	38.82

Protein Annotations

EntrezGene:100265530	wikigene:100265530	MapMan:21.6.1.1	Gene3D:3.30.559.10	EMBL:AM448781	ProteinID:CAN82918
ProteinID:CAN82918.1	InterPro:CAT-like_dom_sf	ProteinID:CCB49693	ProteinID:CCB49693.1	UniProt:F6HBS8	EMBL:FN595513
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009809	GO:GO:0009963
GO:GO:0009987	GO:GO:0010252	GO:GO:0016020	GO:GO:0016740	GO:GO:0016747	GO:GO:0019748
GO:GO:0047172	GO:GO:0047205	InterPro:IPR023213	EntrezGene:LOC100265530	wikigene:LOC100265530	PFAM:PF02458
PANTHER:PTHR31642	PANTHER:PTHR31642:SF116	TIGR:TC64616	InterPro:Transferase	UniParc:UPI00015CA8BE	ArrayExpress:VIT_09s0018g01190
EnsemblPlantsGene:VIT_09s0018g01190	EnsemblPlants:VIT_09s0018g01190.t01	unigene:Vvi.14747	RefSeq:XP_002268988	RefSeq:XP_002268988.1	:

Description

No Description!

Coordinates

chr9:+:18035644..18038207

Molecular Weight (calculated)

47856.4 Da

IEP (calculated)

6.584

GRAVY (calculated)

-0.166

Length

429 amino acids

Sequence
(BLAST)

001: MIINVRESTM VRPAEETPRR SLWNSNVDLV VPRMHTPSVY FYRPSGAANF FDPQVMKEAL SKVLVPFYPM AGRLRRDEDG RIEIDCNAEG VLFVEADTGS
101: VIDDFGDFAP TLELRQLIPT VDYSGDIGSY SLLILQVTHF KCGGVSLGVG MQHHVADGAS GLHFINTWSD MARGLDITIP PFIDRTLLRA RDPPQPAFHH
201: IEYQPPPQLK TPLPNTQNTN VCIFRITRDQ LNTLKNKSKE DGNTISYSSY VMLAGHVWRC ACKARSLPAD QDSKMYIATD GRSRLRPALP PGYFGNVIFT
301: TTPVAVAGEL MSKPLWYAAS KIHNALARMD DEYLRSALDY LELQPDLTAL VRGAHTFRCP NIGITSWTRL PIYDADFGWG RPIFMGPGGI ALEGLAFALP
401: SPTNDGSLSI AISLQEDHMK LFQKYLYEI

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.