Factsheet for TraesCS1B01G005300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G021600.1	Wheat	mitochondrion	75.13	67.8
HORVU1Hr1G081430.3	Barley	cytosol, peroxisome, plastid	61.56	64.3
TraesCS3B01G002000.1	Wheat	mitochondrion	70.1	63.99
TraesCS2B01G374600.1	Wheat	mitochondrion	65.08	59.13
TraesCS6B01G249400.1	Wheat	cytosol, golgi	61.81	55.78
GSMUA_Achr4P01990_001	Banana	mitochondrion	56.53	51.61
CDY05770	Canola	cytosol	51.01	46.88
CDY31956	Canola	cytosol	51.01	46.88
KRH44584	Soybean	cytosol	50.5	46.85
AT5G48930.1	Thale cress	cytosol	50.75	46.65
Bra036480.1-P	Field mustard	cytosol, peroxisome, plastid	49.5	46.46
VIT_09s0018g01190.t01	Wine grape	cytosol	50.0	46.39
Solyc03g117600.2.1	Tomato	cytosol, extracellular	50.5	46.21
PGSC0003DMT400036695	Potato	cytosol	49.25	46.01
KRH23680	Soybean	cytosol, nucleus	50.25	45.56
Bra033526.1-P	Field mustard	mitochondrion	47.49	44.16
CDY22880	Canola	mitochondrion	47.49	44.16
CDY44162	Canola	plastid	47.49	44.16
KRH09635	Soybean	cytosol	40.7	43.32
KRH47315	Soybean	endoplasmic reticulum	49.5	42.37
TraesCS6B01G030200.1	Wheat	cytosol	12.81	38.64
TraesCS7B01G455100.1	Wheat	cytosol	33.17	30.56
TraesCS5B01G221700.1	Wheat	cytosol	32.41	29.72
TraesCS3B01G574700.1	Wheat	peroxisome	32.16	29.29
TraesCS5B01G222000.1	Wheat	plastid	32.16	29.22
TraesCS3B01G545700.1	Wheat	cytosol, peroxisome, plastid	31.91	28.93
TraesCS3B01G486400.1	Wheat	cytosol	30.9	28.34
TraesCS7B01G054000.1	Wheat	cytosol	30.4	28.14
TraesCS5B01G461000.1	Wheat	peroxisome	31.91	28.04
TraesCS7B01G054100.1	Wheat	cytosol	30.15	27.97
TraesCS3B01G488100.1	Wheat	peroxisome	30.15	27.71
TraesCS6B01G017400.1	Wheat	cytosol	29.9	27.36
TraesCS3B01G485500.1	Wheat	cytosol	30.15	27.33
TraesCS6B01G030800.1	Wheat	peroxisome	29.65	26.88
TraesCS6B01G030300.1	Wheat	peroxisome	29.15	26.42
TraesCS6B01G288300.1	Wheat	peroxisome	28.89	26.32
TraesCS3B01G350400.1	Wheat	peroxisome	29.15	26.3
TraesCS5B01G038600.1	Wheat	cytosol	29.4	26.29
TraesCS3B01G485400.1	Wheat	plasma membrane	30.4	25.91
TraesCS2B01G518300.1	Wheat	cytosol	27.14	24.49
TraesCS2B01G519100.1	Wheat	cytosol	26.13	23.64
TraesCS2B01G518900.1	Wheat	cytosol	25.88	23.36
TraesCS6B01G412900.1	Wheat	peroxisome	25.88	23.36
TraesCS4B01G302100.1	Wheat	cytosol	24.62	22.74
TraesCS2B01G604000.1	Wheat	cytosol	24.87	22.35
TraesCS4B01G302000.1	Wheat	cytosol, extracellular, peroxisome	24.12	22.27
TraesCS7B01G410100.1	Wheat	cytosol	24.62	22.27
TraesCS6B01G430300.1	Wheat	cytosol	25.13	22.22
TraesCS4B01G026800.1	Wheat	cytosol	24.62	22.02
TraesCS5B01G336600.1	Wheat	cytosol	23.87	21.89
TraesCS5B01G304300.1	Wheat	cytosol	23.87	21.79
TraesCS4B01G302200.1	Wheat	mitochondrion, peroxisome	23.62	21.71
TraesCS5B01G336700.1	Wheat	cytosol	23.62	21.66
TraesCS5B01G336500.1	Wheat	cytosol	23.62	21.66
TraesCS5B01G336300.1	Wheat	cytosol	23.62	21.66
TraesCS2B01G606400.1	Wheat	cytosol	23.12	21.5
TraesCS5B01G136200.1	Wheat	plastid	22.86	20.87
TraesCS2B01G604100.1	Wheat	peroxisome	23.12	20.44
TraesCS4B01G384800.1	Wheat	cytosol	22.11	20.42
TraesCS5B01G337100.1	Wheat	cytosol	22.36	20.18
TraesCS5B01G337000.1	Wheat	cytosol	22.36	20.18
TraesCS6B01G322500.1	Wheat	cytosol	22.11	19.69
TraesCS1B01G107500.1	Wheat	cytosol	21.36	19.41
TraesCS4B01G302300.1	Wheat	cytosol	20.85	19.35
TraesCS1B01G107300.1	Wheat	cytosol	20.85	19.12
TraesCS1B01G107400.1	Wheat	cytosol	20.85	18.95
TraesCS3B01G234500.1	Wheat	cytosol	16.33	15.44

Protein Annotations

EnsemblPlants:TraesCS1B01G005300.1	EnsemblPlantsGene:TraesCS1B01G005300	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF116
PFAM:PF02458	SEG:seg	MapMan:50.2.3	:	:	:

Description

No Description!

Coordinates

chr1B:+:3269195..3273714

Molecular Weight (calculated)

44134.2 Da

IEP (calculated)

8.415

GRAVY (calculated)

-0.087

Length

398 amino acids

Sequence
(BLAST)

001: MMAIMVRRST MVRPARETLR TRLWNSHLDL LVPRFHTPSV YFYRRPVEIA AMEGFFDGER MWQALAEALI TFYPMAGRLA RDKEGRVEID CNGEGVLFVE
101: ADAPDSTIAD YGDFAPTMEL SRLIPAIDYT QEISSFPLVV LQVTYFKCGA VSLGVGTQHH VADGMSGLHF INSWSDLCRG AKIAVMPFID RTLIRARDPP
201: TPCHPHVEYH PSPALLPSIT QDLSYKATSS GTTVDIFKLT SSDIGRLRSQ LPKGDDISRF STYTMLSAHV WRCVSRARGL PSEQPTKLYC AIDGRKRLNP
301: PLPEGFLGNV LFTATPILEA GCCAASSSIP RCLSQLSPLS SEQDRTLGRN THTPHRGGTS FALFSRSDTH MLHPFSSALS ASLLSLLRCK IYIHIARG

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.