Factsheet for TraesCS3B01G350400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G314900.1	Wheat	peroxisome	95.92	95.92
TraesCS7B01G054100.1	Wheat	cytosol	89.12	91.61
Zm00001d045091_P001	Maize	cytosol	75.51	76.91
Zm00001d037073_P001	Maize	cytosol	75.51	76.03
EER89344	Sorghum	cytosol	74.15	74.83
TraesCS7B01G054000.1	Wheat	cytosol	72.79	74.65
TraesCS6B01G017400.1	Wheat	cytosol	71.66	72.64
TraesCS5B01G222000.1	Wheat	plastid	49.89	50.23
TraesCS7B01G455100.1	Wheat	cytosol	39.46	40.28
TraesCS5B01G221700.1	Wheat	cytosol	38.55	39.17
TraesCS5B01G461000.1	Wheat	peroxisome	39.46	38.41
TraesCS3B01G486400.1	Wheat	cytosol	37.19	37.79
TraesCS3B01G485500.1	Wheat	cytosol	37.41	37.59
TraesCS3B01G545700.1	Wheat	cytosol, peroxisome, plastid	36.05	36.22
TraesCS3B01G574700.1	Wheat	peroxisome	35.83	36.16
TraesCS6B01G288300.1	Wheat	peroxisome	35.6	35.93
TraesCS2B01G374600.1	Wheat	mitochondrion	35.37	35.62
TraesCS3B01G488100.1	Wheat	peroxisome	34.47	35.1
TraesCS5B01G038600.1	Wheat	cytosol	35.37	35.06
TraesCS3B01G485400.1	Wheat	plasma membrane	36.96	34.9
TraesCS6B01G030800.1	Wheat	peroxisome	34.47	34.62
TraesCS6B01G249400.1	Wheat	cytosol, golgi	34.47	34.47
TraesCS3B01G002000.1	Wheat	mitochondrion	33.56	33.95
TraesCS6B01G030300.1	Wheat	peroxisome	33.56	33.71
TraesCS6B01G030200.1	Wheat	cytosol	9.98	33.33
TraesCS1B01G005300.1	Wheat	mitochondrion	26.3	29.15
TraesCS2B01G518300.1	Wheat	cytosol	28.34	28.34
TraesCS4B01G302000.1	Wheat	cytosol, extracellular, peroxisome	26.98	27.61
TraesCS6B01G412900.1	Wheat	peroxisome	27.21	27.21
TraesCS4B01G302100.1	Wheat	cytosol	26.08	26.68
TraesCS7B01G410100.1	Wheat	cytosol	26.3	26.36
TraesCS2B01G519100.1	Wheat	cytosol	26.08	26.14
TraesCS2B01G518900.1	Wheat	cytosol	26.08	26.08
TraesCS4B01G384800.1	Wheat	cytosol	25.4	25.99
TraesCS4B01G302200.1	Wheat	mitochondrion, peroxisome	25.4	25.87
TraesCS1B01G107400.1	Wheat	cytosol	25.62	25.8
TraesCS2B01G606400.1	Wheat	cytosol	24.72	25.47
TraesCS4B01G026800.1	Wheat	cytosol	25.62	25.39
TraesCS1B01G107500.1	Wheat	cytosol	25.17	25.34
TraesCS6B01G430300.1	Wheat	cytosol	25.85	25.33
TraesCS1B01G107300.1	Wheat	cytosol	24.72	25.12
TraesCS5B01G336600.1	Wheat	cytosol	24.49	24.88
TraesCS2B01G604000.1	Wheat	cytosol	24.94	24.83
TraesCS5B01G304300.1	Wheat	cytosol	24.49	24.77
TraesCS5B01G336500.1	Wheat	cytosol	24.26	24.65
TraesCS5B01G136200.1	Wheat	plastid	24.26	24.54
TraesCS5B01G336300.1	Wheat	cytosol	24.04	24.42
TraesCS5B01G336700.1	Wheat	cytosol	23.81	24.19
TraesCS4B01G302300.1	Wheat	cytosol	23.36	24.01
TraesCS5B01G337000.1	Wheat	cytosol	23.81	23.81
TraesCS5B01G337100.1	Wheat	cytosol	23.36	23.36
TraesCS2B01G604100.1	Wheat	peroxisome	23.58	23.11
TraesCS6B01G322500.1	Wheat	cytosol	23.36	23.04
TraesCS3B01G234500.1	Wheat	cytosol	19.27	20.19

Protein Annotations

EnsemblPlants:TraesCS3B01G350400.1	EnsemblPlantsGene:TraesCS3B01G350400	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF111
PFAM:PF02458	SEG:seg	TMHMM:TMhelix	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr3B:-:560556356..560557681

Molecular Weight (calculated)

47323.1 Da

IEP (calculated)

6.669

GRAVY (calculated)

0.134

Length

441 amino acids

Sequence
(BLAST)

001: MTMVEVLSSE LVVPAGKTPG GNIWLSNLDL AGRRGYSPTV YFFRHNGEPS FFAADAMKDS LARALVAFYP LAGRLGLDGS GRIQVDCTGE GVAFLTARSE
101: HYALEELMND FVPCGEMRDL LVPPTPAPNP PCALLFVQIT RLRCGGMVLG QAMHHSIVDA RGAAHFFETW ASISRGGGAP TVPPCFDHTL LAARPAQSRA
201: VLYDHPEYKP EPEPVDPVSA ATYASAIITM TKGQVGALKA RCLGSSAFRA VVALVWQCVC RARALPPAAE TWLYSMVDMR ARLDPPLPAG YFGNAVIRTS
301: VSATVEEVVS SPLVHAARLV RAATSQSDDH ARSLVDYLEG VDTMNLPRRG ISRAHLRAIS WLGMSLLDAD FGWGAPAFMV PALMYYSGFL YVMNAPGKDG
401: ALALVLSLEP ESMPAFSKVF ADELARLDAG AEKTSTGLSK M

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.