Factsheet for TraesCS7B01G054100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G150200.1	Wheat	cytosol	98.14	98.14
TraesCS7D01G151900.1	Wheat	cytosol	97.44	97.44
HORVU7Hr1G030780.1	Barley	cytosol	96.5	96.28
TraesCS3B01G350400.1	Wheat	peroxisome	91.61	89.12
Zm00001d045091_P001	Maize	cytosol	80.65	79.91
Zm00001d037073_P001	Maize	cytosol	81.35	79.68
EER89344	Sorghum	cytosol	79.95	78.49
TraesCS7B01G054000.1	Wheat	cytosol	78.32	78.14
TraesCS6B01G017400.1	Wheat	cytosol	75.06	74.02
TraesCS5B01G222000.1	Wheat	plastid	52.91	51.83
TraesCS7B01G455100.1	Wheat	cytosol	41.72	41.44
TraesCS5B01G221700.1	Wheat	cytosol	41.03	40.55
TraesCS5B01G461000.1	Wheat	peroxisome	41.49	39.29
TraesCS3B01G486400.1	Wheat	cytosol	39.16	38.71
TraesCS3B01G485500.1	Wheat	cytosol	38.93	38.04
TraesCS6B01G288300.1	Wheat	peroxisome	38.0	37.3
TraesCS2B01G374600.1	Wheat	mitochondrion	38.0	37.21
TraesCS3B01G545700.1	Wheat	cytosol, peroxisome, plastid	38.0	37.13
TraesCS3B01G574700.1	Wheat	peroxisome	37.53	36.84
TraesCS6B01G249400.1	Wheat	cytosol, golgi	37.76	36.73
TraesCS5B01G038600.1	Wheat	cytosol	37.76	36.4
TraesCS3B01G488100.1	Wheat	peroxisome	36.36	36.03
TraesCS6B01G030200.1	Wheat	cytosol	10.96	35.61
TraesCS3B01G485400.1	Wheat	plasma membrane	38.69	35.55
TraesCS3B01G002000.1	Wheat	mitochondrion	35.43	34.86
TraesCS6B01G030800.1	Wheat	peroxisome	35.66	34.85
TraesCS6B01G030300.1	Wheat	peroxisome	34.73	33.94
TraesCS1B01G005300.1	Wheat	mitochondrion	27.97	30.15
TraesCS2B01G518300.1	Wheat	cytosol	30.3	29.48
TraesCS6B01G412900.1	Wheat	peroxisome	28.9	28.12
TraesCS4B01G302000.1	Wheat	cytosol, extracellular, peroxisome	27.97	27.84
TraesCS7B01G410100.1	Wheat	cytosol	28.21	27.5
TraesCS2B01G519100.1	Wheat	cytosol	27.74	27.05
TraesCS2B01G518900.1	Wheat	cytosol	27.74	26.98
TraesCS4B01G302100.1	Wheat	cytosol	27.04	26.91
TraesCS4B01G384800.1	Wheat	cytosol	26.81	26.68
TraesCS2B01G606400.1	Wheat	cytosol	26.57	26.64
TraesCS4B01G026800.1	Wheat	cytosol	27.27	26.29
TraesCS4B01G302200.1	Wheat	mitochondrion, peroxisome	26.34	26.1
TraesCS6B01G430300.1	Wheat	cytosol	27.27	26.0
TraesCS2B01G604000.1	Wheat	cytosol	26.57	25.73
TraesCS5B01G336500.1	Wheat	cytosol	25.87	25.58
TraesCS1B01G107400.1	Wheat	cytosol	26.11	25.57
TraesCS5B01G304300.1	Wheat	cytosol	25.87	25.46
TraesCS5B01G336600.1	Wheat	cytosol	25.64	25.35
TraesCS5B01G336300.1	Wheat	cytosol	25.64	25.35
TraesCS1B01G107300.1	Wheat	cytosol	25.41	25.12
TraesCS1B01G107500.1	Wheat	cytosol	25.64	25.11
TraesCS5B01G336700.1	Wheat	cytosol	25.17	24.88
TraesCS5B01G136200.1	Wheat	plastid	25.17	24.77
TraesCS5B01G337000.1	Wheat	cytosol	25.41	24.72
TraesCS5B01G337100.1	Wheat	cytosol	25.17	24.49
TraesCS4B01G302300.1	Wheat	cytosol	24.01	24.01
TraesCS2B01G604100.1	Wheat	peroxisome	24.48	23.33
TraesCS6B01G322500.1	Wheat	cytosol	24.24	23.27
TraesCS3B01G234500.1	Wheat	cytosol	20.28	20.67

Protein Annotations

EnsemblPlants:TraesCS7B01G054100.1	EnsemblPlantsGene:TraesCS7B01G054100	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF111
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr7B:-:57268056..57269345

Molecular Weight (calculated)

46047.5 Da

IEP (calculated)

6.419

GRAVY (calculated)

0.121

Length

429 amino acids

Sequence
(BLAST)

001: MAMVQVLSSE LVVPAEPTPG GSIWLSNLDL AGRRGYTPTV YFFRPNGDPG FFAADAMRDS LARALVAFYP LAGRLGLDGT GRVQVDCTGE GVVFVTARSE
101: HYALEELMND FVPCDEMRDL LVPPTPAPNP PCALLFVQIT RLRCGGLVLG QAMHHSIVDA RGAAHFFETW ASISRGGGAP TVPPCFDHTL LAARPPQSRA
201: VLYDHPEYKP EPEPVDPVSA STYASAIVTM SKGQVGALKA RCLGASTFRA VVALVWQCVC RARALPPSAE TRLYSMVDMR ARLDPQLPAG YFGNAVIRTS
301: VSATVEEVVS SPLVHAARLA RAATSQGGDH ARSLVDYLEG VDTMNLPRSG ISRAHLRAIS WMGMSLSDAD FGWGAPAFMG PALMYYSGFV YVMNAPGKDG
401: ALALVLSLEP ESMPAFRKVF ADELARLEL

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.