Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- peroxisome 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G359800.1 | Wheat | peroxisome | 91.38 | 91.59 |
| TraesCS6A01G375300.1 | Wheat | mitochondrion | 93.65 | 91.17 |
| HORVU6Hr1G088530.1 | Barley | cytosol | 31.29 | 83.64 |
| HORVU6Hr1G088480.1 | Barley | extracellular, plasma membrane | 87.53 | 81.95 |
| TraesCS7B01G410100.1 | Wheat | cytosol | 76.19 | 76.36 |
| TraesCS2B01G518900.1 | Wheat | cytosol | 66.89 | 66.89 |
| TraesCS2B01G518300.1 | Wheat | cytosol | 66.44 | 66.44 |
| TraesCS2B01G519100.1 | Wheat | cytosol | 66.21 | 66.36 |
| OQU83825 | Sorghum | peroxisome, plastid | 56.24 | 55.98 |
| TraesCS2B01G604000.1 | Wheat | cytosol | 56.01 | 55.76 |
| TraesCS2B01G604100.1 | Wheat | peroxisome | 54.65 | 53.56 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 44.44 | 52.13 |
| Solyc11g066640.1.1 | Tomato | cytosol | 50.57 | 50.8 |
| PGSC0003DMT400001145 | Potato | cytosol | 50.11 | 50.11 |
| PGSC0003DMT400018441 | Potato | cytosol | 49.21 | 48.76 |
| TraesCS4B01G026800.1 | Wheat | cytosol | 48.98 | 48.54 |
| TraesCS5B01G304300.1 | Wheat | cytosol | 47.85 | 48.39 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 42.18 | 48.19 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 38.32 | 48.01 |
| Solyc06g074710.1.1 | Tomato | cytosol | 48.3 | 47.97 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 43.99 | 47.43 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 37.19 | 47.26 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 36.96 | 47.25 |
| TraesCS6B01G430300.1 | Wheat | cytosol | 48.07 | 47.11 |
| TraesCS5B01G337100.1 | Wheat | cytosol | 46.94 | 46.94 |
| TraesCS5B01G337000.1 | Wheat | cytosol | 46.71 | 46.71 |
| TraesCS5B01G336300.1 | Wheat | cytosol | 45.8 | 46.54 |
| TraesCS5B01G336500.1 | Wheat | cytosol | 44.44 | 45.16 |
| Solyc11g071470.1.1 | Tomato | cytosol | 45.35 | 45.15 |
| Solyc11g071480.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 45.35 | 45.15 |
| TraesCS5B01G336600.1 | Wheat | cytosol | 44.22 | 44.93 |
| TraesCS5B01G336700.1 | Wheat | cytosol | 43.99 | 44.7 |
| PGSC0003DMT400048126 | Potato | cytosol | 39.46 | 38.58 |
| TraesCS4B01G302100.1 | Wheat | cytosol | 36.05 | 36.89 |
| TraesCS2B01G606400.1 | Wheat | cytosol | 34.92 | 35.98 |
| TraesCS4B01G302000.1 | Wheat | cytosol, extracellular, peroxisome | 34.69 | 35.5 |
| TraesCS1B01G107400.1 | Wheat | cytosol | 34.92 | 35.16 |
| TraesCS1B01G107500.1 | Wheat | cytosol | 34.92 | 35.16 |
| PGSC0003DMT400048130 | Potato | cytoskeleton, cytosol, peroxisome | 45.35 | 35.15 |
| TraesCS4B01G302200.1 | Wheat | mitochondrion, peroxisome | 34.47 | 35.1 |
| TraesCS1B01G107300.1 | Wheat | cytosol | 34.24 | 34.79 |
| TraesCS5B01G136200.1 | Wheat | plastid | 33.33 | 33.72 |
| TraesCS4B01G384800.1 | Wheat | cytosol | 32.88 | 33.64 |
| TraesCS6B01G322500.1 | Wheat | cytosol | 33.56 | 33.11 |
| TraesCS4B01G302300.1 | Wheat | cytosol | 31.52 | 32.4 |
| TraesCS2B01G374600.1 | Wheat | mitochondrion | 31.07 | 31.28 |
| TraesCS6B01G249400.1 | Wheat | cytosol, golgi | 31.07 | 31.07 |
| TraesCS3B01G002000.1 | Wheat | mitochondrion | 30.39 | 30.73 |
| TraesCS3B01G234500.1 | Wheat | cytosol | 27.89 | 29.22 |
| TraesCS5B01G221700.1 | Wheat | cytosol | 28.57 | 29.03 |
| TraesCS5B01G222000.1 | Wheat | plastid | 28.8 | 29.0 |
| TraesCS7B01G054100.1 | Wheat | cytosol | 28.12 | 28.9 |
| TraesCS7B01G455100.1 | Wheat | cytosol | 28.12 | 28.7 |
| TraesCS3B01G350400.1 | Wheat | peroxisome | 27.21 | 27.21 |
| TraesCS7B01G054000.1 | Wheat | cytosol | 26.3 | 26.98 |
| TraesCS5B01G461000.1 | Wheat | peroxisome | 27.21 | 26.49 |
| TraesCS6B01G030800.1 | Wheat | peroxisome | 26.08 | 26.2 |
| TraesCS3B01G486400.1 | Wheat | cytosol | 25.62 | 26.04 |
| TraesCS1B01G005300.1 | Wheat | mitochondrion | 23.36 | 25.88 |
| TraesCS5B01G038600.1 | Wheat | cytosol | 25.85 | 25.62 |
| TraesCS6B01G030300.1 | Wheat | peroxisome | 25.4 | 25.51 |
| TraesCS3B01G574700.1 | Wheat | peroxisome | 24.94 | 25.17 |
| TraesCS3B01G545700.1 | Wheat | cytosol, peroxisome, plastid | 24.94 | 25.06 |
| TraesCS3B01G488100.1 | Wheat | peroxisome | 24.26 | 24.71 |
| TraesCS3B01G485500.1 | Wheat | cytosol | 24.49 | 24.6 |
| TraesCS6B01G017400.1 | Wheat | cytosol | 24.26 | 24.6 |
| TraesCS6B01G288300.1 | Wheat | peroxisome | 24.04 | 24.26 |
| TraesCS6B01G030200.1 | Wheat | cytosol | 6.8 | 22.73 |
| TraesCS3B01G485400.1 | Wheat | plasma membrane | 24.04 | 22.7 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G412900.1 | EnsemblPlantsGene:TraesCS6B01G412900 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF44 |
| PFAM:PF02458 | SEG:seg | MapMan:50.2.3 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:686363793..686365120
Molecular Weight (calculated)
47565.7 Da
IEP (calculated)
7.311
GRAVY (calculated)
-0.057
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MKITVQSSKS IKPDYGAHRP AAPPFTANVV PLSVFDKANL DTQVSVLYAF HPPAPPNGVL EAGLARALVD YREFAGRLAR DADGSRRAIL LNDAGARFVE
101: ATAGVALGSV MPLRPTPAVL SLHPSGGDEL MLVQATRFAC GSLVVGLTVH HTVADGRGFC NFILAWGQAT RGAPVDPVPV HDRPSFFAPR SPKIEHEHRR
201: VEFKPYGARK DDYAGGGGGE EEEEVVVERV HFSADRIAKL KSQASSAGAR YSTVQCVLAH LWRCVTRARG LDGRDATALL IGVDGRRRMS PPVPDGYTGN
301: VVLWARPTAT ARELMDMPLR HAAELIGRAV ARVDDAYYKS FIDFACSGTV EEERLVPTAD AADTVLSPNV EVNSWVRLPF YDLDLGGGRP FLFMPSYVPV
401: EGVAFLVASF AGDGSVDAYV SLFRRDMDAF RNCCASGLSK L
101: ATAGVALGSV MPLRPTPAVL SLHPSGGDEL MLVQATRFAC GSLVVGLTVH HTVADGRGFC NFILAWGQAT RGAPVDPVPV HDRPSFFAPR SPKIEHEHRR
201: VEFKPYGARK DDYAGGGGGE EEEEVVVERV HFSADRIAKL KSQASSAGAR YSTVQCVLAH LWRCVTRARG LDGRDATALL IGVDGRRRMS PPVPDGYTGN
301: VVLWARPTAT ARELMDMPLR HAAELIGRAV ARVDDAYYKS FIDFACSGTV EEERLVPTAD AADTVLSPNV EVNSWVRLPF YDLDLGGGRP FLFMPSYVPV
401: EGVAFLVASF AGDGSVDAYV SLFRRDMDAF RNCCASGLSK L
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.