Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc11g071480.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 92.78 | 92.78 |
PGSC0003DMT400048126 | Potato | cytosol | 83.3 | 81.82 |
PGSC0003DMT400048130 | Potato | cytoskeleton, cytosol, peroxisome | 95.03 | 73.99 |
Solyc06g074710.1.1 | Tomato | cytosol | 66.82 | 66.67 |
Solyc11g066640.1.1 | Tomato | cytosol | 65.46 | 66.06 |
GSMUA_Achr8P15170_001 | Banana | cytosol | 45.82 | 52.59 |
GSMUA_Achr8P03170_001 | Banana | cytosol | 44.47 | 52.39 |
Os04t0664500-01 | Rice | cytosol | 14.45 | 51.2 |
TraesCS5D01G342800.1 | Wheat | cytosol | 50.34 | 50.8 |
TraesCS5A01G338700.1 | Wheat | cytosol | 49.89 | 50.34 |
TraesCS5A01G338600.1 | Wheat | cytosol | 50.11 | 50.34 |
TraesCS5B01G337000.1 | Wheat | cytosol | 49.89 | 50.11 |
TraesCS5B01G337100.1 | Wheat | cytosol | 49.44 | 49.66 |
TraesCS5D01G342700.1 | Wheat | cytosol | 49.44 | 49.66 |
TraesCS5A01G304000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 48.53 | 49.65 |
HORVU3Hr1G027720.1 | Barley | cytosol | 14.0 | 49.6 |
OQU91195 | Sorghum | cytosol | 51.02 | 49.34 |
TraesCS5A01G337800.1 | Wheat | cytosol | 48.08 | 49.08 |
Os04t0664600-00 | Rice | cytosol | 49.66 | 49.0 |
GSMUA_Achr8P03210_001 | Banana | cytosol | 38.83 | 48.86 |
TraesCS5D01G342400.1 | Wheat | cytosol, golgi, plastid | 47.86 | 48.85 |
TraesCS5A01G337700.1 | Wheat | cytosol | 47.86 | 48.85 |
Os09t0543900-01 | Rice | cytosol | 48.08 | 48.74 |
Zm00001d033521_P001 | Maize | cytosol | 49.89 | 48.68 |
HORVU2Hr1G109430.2 | Barley | cytosol | 48.08 | 48.63 |
TraesCS5D01G310800.1 | Wheat | cytosol | 47.86 | 48.62 |
TraesCS5B01G304300.1 | Wheat | cytosol | 47.86 | 48.62 |
TraesCS5B01G336600.1 | Wheat | cytosol | 47.63 | 48.62 |
TraesCS5B01G336300.1 | Wheat | cytosol | 47.63 | 48.62 |
OQU89853 | Sorghum | cytosol | 48.53 | 48.53 |
GSMUA_Achr8P03190_001 | Banana | cytosol | 37.92 | 48.41 |
TraesCS5A01G337900.1 | Wheat | cytosol | 47.4 | 48.39 |
TraesCS5B01G336700.1 | Wheat | cytosol | 47.4 | 48.39 |
TraesCS5D01G342100.1 | Wheat | cytosol | 47.4 | 48.39 |
HORVU5Hr1G084820.2 | Barley | cytosol | 47.4 | 48.39 |
HORVU5Hr1G084810.1 | Barley | cytosol | 46.73 | 48.25 |
TraesCS5D01G342300.1 | Wheat | cytosol | 47.18 | 48.16 |
TraesCS5A01G337500.1 | Wheat | cytosol | 47.18 | 48.16 |
TraesCS5B01G336500.1 | Wheat | cytosol | 47.18 | 48.16 |
GSMUA_Achr8P03200_001 | Banana | cytosol | 37.47 | 48.12 |
Zm00001d021329_P001 | Maize | cytosol | 48.76 | 48.11 |
Zm00001d006263_P001 | Maize | cytosol | 48.31 | 48.09 |
HORVU2Hr1G109590.1 | Barley | cytosol | 34.99 | 47.99 |
TraesCS2B01G519100.1 | Wheat | cytosol | 47.63 | 47.95 |
TraesCS4D01G024500.1 | Wheat | cytosol | 48.31 | 47.87 |
Zm00001d021324_P001 | Maize | cytosol | 47.86 | 47.75 |
GSMUA_Achr8P03180_001 | Banana | plastid | 44.02 | 47.68 |
TraesCS2D01G490900.1 | Wheat | cytosol | 47.4 | 47.62 |
HORVU5Hr1G077720.1 | Barley | mitochondrion | 46.73 | 47.48 |
HORVU5Hr1G079580.1 | Barley | mitochondrion | 46.73 | 47.48 |
TraesCS2D01G490400.1 | Wheat | cytosol | 47.18 | 47.39 |
TraesCS2B01G518900.1 | Wheat | cytosol | 47.18 | 47.39 |
TraesCS2B01G518300.1 | Wheat | cytosol | 47.18 | 47.39 |
TraesCS2A01G490000.1 | Wheat | cytosol | 47.18 | 47.39 |
Os09t0544000-01 | Rice | cytosol | 48.31 | 47.35 |
TraesCS4B01G026800.1 | Wheat | cytosol | 47.4 | 47.19 |
HORVU4Hr1G004050.1 | Barley | cytosol | 47.18 | 47.07 |
TraesCS7B01G410100.1 | Wheat | cytosol | 46.73 | 47.05 |
HORVU5Hr1G084980.1 | Barley | cytosol | 49.21 | 46.98 |
TraesCS2D01G491100.1 | Wheat | cytosol | 46.73 | 46.94 |
TraesCS6B01G430300.1 | Wheat | cytosol | 46.95 | 46.22 |
TraesCS6D01G359800.1 | Wheat | peroxisome | 45.82 | 46.14 |
EES10710 | Sorghum | cytosol | 47.63 | 46.07 |
Zm00001d022592_P001 | Maize | cytosol | 46.28 | 46.07 |
Zm00001d006260_P001 | Maize | cytosol | 42.21 | 46.06 |
Zm00001d003856_P001 | Maize | cytosol | 46.5 | 45.98 |
TraesCS6B01G412900.1 | Wheat | peroxisome | 45.15 | 45.35 |
TraesCSU01G241400.1 | Wheat | mitochondrion | 15.8 | 44.87 |
TraesCS4A01G287700.1 | Wheat | mitochondrion | 15.8 | 44.87 |
TraesCS6A01G375300.1 | Wheat | mitochondrion | 45.37 | 44.37 |
TraesCS4A01G287500.1 | Wheat | cytosol | 45.6 | 43.44 |
TraesCS4A01G285200.1 | Wheat | cytosol | 45.6 | 43.44 |
TraesCSU01G244500.1 | Wheat | cytosol | 17.83 | 43.41 |
HORVU6Hr1G088480.1 | Barley | extracellular, plasma membrane | 45.15 | 42.46 |
TraesCS2B01G604000.1 | Wheat | cytosol | 42.44 | 42.44 |
HORVU6Hr1G088530.1 | Barley | cytosol | 15.8 | 42.42 |
Zm00001d048870_P001 | Maize | peroxisome | 43.34 | 42.2 |
TraesCS2A01G490700.1 | Wheat | plastid | 47.4 | 41.92 |
TraesCS2D01G016600.1 | Wheat | cytosol | 44.02 | 41.76 |
TraesCS3D01G545300.1 | Wheat | cytosol | 42.21 | 41.46 |
Zm00001d007606_P001 | Maize | peroxisome | 43.12 | 40.9 |
Zm00001d048872_P001 | Maize | cytosol | 42.21 | 40.48 |
TraesCS2B01G604100.1 | Wheat | peroxisome | 40.41 | 39.78 |
Zm00001d048871_P001 | Maize | peroxisome | 41.53 | 39.66 |
HORVU2Hr1G109470.1 | Barley | cytosol | 17.61 | 39.39 |
OQU83825 | Sorghum | peroxisome, plastid | 38.83 | 38.83 |
EER88164 | Sorghum | cytosol | 29.57 | 37.75 |
Os05t0116800-00 | Rice | cytosol, plastid, vacuole | 31.83 | 34.73 |
HORVU2Hr1G002500.2 | Barley | cytosol | 40.86 | 32.26 |
Solyc07g005760.2.1 | Tomato | cytosol | 30.02 | 30.93 |
Solyc03g117600.2.1 | Tomato | cytosol, extracellular | 29.12 | 29.66 |
Solyc07g015960.1.1 | Tomato | cytosol | 26.64 | 26.16 |
HORVU2Hr1G124070.1 | Barley | cytosol | 14.67 | 21.67 |
Protein Annotations
EnsemblPlants:Solyc11g071470.1.1 | EnsemblPlantsGene:Solyc11g071470.1 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF13 |
PFAM:PF02458 | SEG:seg | UniParc:UPI00027696C1 | UniProt:K4DAK4 | MapMan:50.2.3 | : |
Description
No Description!
Coordinates
chr11:+:54930183..54931514
Molecular Weight (calculated)
50292.7 Da
IEP (calculated)
7.035
GRAVY (calculated)
-0.144
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVKIESSKI IKPLYEGIPP STTIHIPFNV FDNVTFDTLM ALIYAYRPPT PPTSTIETGL RKTLSIYREW AGRIGEDEHG NRGVFLNDEG VRFIEASVDA
101: SLDEVLPLKP SPSMLSLHPS LKDVVELIQV QVTRFTCGSV VVGFTGHHMI ADGHAASNFF VAWGQACRGM EITPIPMNDR AIFRPRNPPL VEYNHVGAEF
201: VSKLVNKELV KINNDQDKEK NIIVHKVHFT LEFLGKLKAH ASFMNGKAKT YSTFESLIAH LWRVITNSRN LNASQNTQIR ISVDGRRRIT PRVPDEFFGN
301: MVLWAFPTSK VKDLLDEPLH YATKIIHEAI TKVDDKYFKS FIDFANDEKV MTRQDLIPSA NMKNDSLCPN LEVDSWLRFP FYDLDFGTGC PFLFMPSYYP
401: IEGMMFLVPS FIGDGSIDAF IPLYEHNLTN FKKICYSLDL KAK
101: SLDEVLPLKP SPSMLSLHPS LKDVVELIQV QVTRFTCGSV VVGFTGHHMI ADGHAASNFF VAWGQACRGM EITPIPMNDR AIFRPRNPPL VEYNHVGAEF
201: VSKLVNKELV KINNDQDKEK NIIVHKVHFT LEFLGKLKAH ASFMNGKAKT YSTFESLIAH LWRVITNSRN LNASQNTQIR ISVDGRRRIT PRVPDEFFGN
301: MVLWAFPTSK VKDLLDEPLH YATKIIHEAI TKVDDKYFKS FIDFANDEKV MTRQDLIPSA NMKNDSLCPN LEVDSWLRFP FYDLDFGTGC PFLFMPSYYP
401: IEGMMFLVPS FIGDGSIDAF IPLYEHNLTN FKKICYSLDL KAK
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.