Factsheet for Solyc07g015960.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400087784	Potato	cytosol	95.12	95.12
VIT_11s0103g00200.t01	Wine grape	cytosol	58.31	57.68
KRH02826	Soybean	cytosol	54.77	54.29
CDY66506	Canola	cytosol	51.22	52.26
KRH02825	Soybean	cytosol	52.55	51.52
Bra024450.1-P	Field mustard	cytosol	43.24	51.32
Bra038561.1-P	Field mustard	cytosol	51.22	51.22
CDY03367	Canola	cytosol	51.22	51.22
CDY56515	Canola	cytosol	43.02	51.05
CDY62143	Canola	cytosol	43.02	51.05
AT2G19070.1	Thale cress	cytosol	50.11	50.11
Solyc03g117600.2.1	Tomato	cytosol, extracellular	34.81	36.09
Solyc07g005760.2.1	Tomato	cytosol	32.82	34.42
Solyc06g074710.1.1	Tomato	cytosol	28.6	29.05
Solyc11g066640.1.1	Tomato	cytosol	26.61	27.33
Solyc11g071480.1.1	Tomato	cytoskeleton, cytosol, peroxisome	26.39	26.86
Solyc11g071470.1.1	Tomato	cytosol	26.16	26.64
TraesCS6B01G030200.1	Wheat	cytosol	7.1	24.24

Protein Annotations

Gene3D:3.30.559.10	MapMan:8.4.2	InterPro:CAT-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653	GO:GO:0009987
GO:GO:0010584	GO:GO:0016043	GO:GO:0016410	GO:GO:0016740	GO:GO:0016747	GO:GO:0080072
GO:GO:0080073	GO:GO:0080074	GO:GO:0080075	GO:GO:0080088	InterPro:IPR023213	UniProt:K4CCB3
PFAM:PF02458	PANTHER:PTHR31642	PANTHER:PTHR31642:SF57	EnsemblPlantsGene:Solyc07g015960.1	EnsemblPlants:Solyc07g015960.1.1	InterPro:Transferase
UniParc:UPI000276BBF1	SEG:seg	:	:	:	:

Description

Spermidine hydroxycinnamoyl transferase [Source:Projected from Arabidopsis thaliana (AT2G19070) UniProtKB/Swiss-Prot;Acc:O64470]

Coordinates

chr7:-:6048054..6049409

Molecular Weight (calculated)

50753.6 Da

IEP (calculated)

5.784

GRAVY (calculated)

-0.175

Length

451 amino acids

Sequence
(BLAST)

001: MKVILKNQWV VKPAEATWNG TVSLSEFDQT FALTHVPTIY YYKYFNDFVT DEIVDTLKIS LSKALVYFYP LAGRLRWING SRLELDCDAS GVVLTEAEAD
101: AKLDNLTDFL LSPDYNSLFP RVDYTVEINE LPLLFVQLTK FQCGGIALSF AISHAVVDGQ SALYFFSEWA RIARGEPLMF SPCHDRKLLR AGEPANASPT
201: FEHLQFNTPP LLIGKSSTEN EKKKTTKGAM LKLTKHQVEM LREKANQGRC LEDSKERSYT RYEVVTAHIW RCACKARGHK FEQPTNLCIC VNIRQKMNPP
301: LPNTYFGNAI VDVIATGASG DIASSPLECA AKRVREAINM VTSDYANSTI NFLKKQEDLS IYQDIHAFRN KEGPFYGNPN LGVISWISLP VLGLDFGWGK
401: EIHMSPGIHE YDGDCVILPE NEGDGSLTVA IVLQHAHVDA FEKFFYEDIE C

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.