Factsheet for PGSC0003DMT400087784

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g015960.1.1	Tomato	cytosol	95.12	95.12
VIT_11s0103g00200.t01	Wine grape	cytosol	58.54	57.89
KRH02826	Soybean	cytosol	55.21	54.73
CDY66506	Canola	cytosol	50.78	51.81
KRH02825	Soybean	cytosol	52.77	51.74
Bra024450.1-P	Field mustard	cytosol	43.24	51.32
CDY03367	Canola	cytosol	51.22	51.22
Bra038561.1-P	Field mustard	cytosol	51.22	51.22
CDY62143	Canola	cytosol	43.02	51.05
CDY56515	Canola	cytosol	43.02	51.05
AT2G19070.1	Thale cress	cytosol	51.0	51.0
PGSC0003DMT400036695	Potato	cytosol	34.37	36.38
PGSC0003DMT400029079	Potato	cytosol	28.38	35.56
PGSC0003DMT400018441	Potato	cytosol	27.94	28.31
PGSC0003DMT400001145	Potato	cytosol	26.61	27.21
PGSC0003DMT400048126	Potato	cytosol	24.17	24.17
TraesCS6B01G030200.1	Wheat	cytosol	6.87	23.48
PGSC0003DMT400048130	Potato	cytoskeleton, cytosol, peroxisome	26.39	20.91

Protein Annotations

EntrezGene:102581009	Gene3D:3.30.559.10	MapMan:8.4.2	InterPro:CAT-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653
GO:GO:0009987	GO:GO:0010584	GO:GO:0016043	GO:GO:0016410	GO:GO:0016740	GO:GO:0016747
GO:GO:0080072	GO:GO:0080073	GO:GO:0080074	GO:GO:0080075	GO:GO:0080088	InterPro:IPR023213
UniProt:M1DEJ6	PFAM:PF02458	EnsemblPlantsGene:PGSC0003DMG400037355	PGSC:PGSC0003DMG400037355	EnsemblPlants:PGSC0003DMT400087784	PANTHER:PTHR31642
PANTHER:PTHR31642:SF57	SUPFAM:SSF52777	InterPro:Transferase	UniParc:UPI00029687B4	RefSeq:XP_006359722.1	SEG:seg

Description

Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400037355]

Coordinates

chr7:-:8716533..8717888

Molecular Weight (calculated)

50715.7 Da

IEP (calculated)

5.787

GRAVY (calculated)

-0.125

Length

451 amino acids

Sequence
(BLAST)

001: MKVILKNHWV VKPAEATWNG TVSLSEFDQT FAVTHVPTIY YYKFFHDFVT DEIIETLKTS LSKTLVYFYP LAGRLRWING SRLELDCDAS GVVLTEAEAD
101: AKLDNLTDFL LSPDYNSLFP RVDYTVPIDE LPLLFVQLTK FQCGGIALSF AISHAVVDGQ SALYFFSEWA RLARGEPLMF APCHDRKLLR AGEPAVASPT
201: FEHLQFNIPP LLIGKSSTEN EKKKETKGAM LKLTKLQVEM LREKANQGRS IEDSKERSYT RYEVVTAHIW RCACKARGHK FEQPTNLCIC VNIRKKMDPP
301: LPNTYFGNAI VDVIATGASG DIASSPLECA AKRVREAINM VTSDYANSTI NFLKKQEDLS IYQDIHAFRN KEGPFYGNPN LGVISWISLP VLGLDFGWGK
401: EIHMSPGIHE YDGDCVILPE NEGDGSLTVA IVLQLAHVNA FEKFFYEDIE C

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.