Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024450.1-P | Field mustard | cytosol | 66.74 | 79.21 |
| CDY66506 | Canola | cytosol | 77.38 | 78.96 |
| CDY56515 | Canola | cytosol | 66.52 | 78.95 |
| CDY62143 | Canola | cytosol | 66.52 | 78.95 |
| Bra038561.1-P | Field mustard | cytosol | 78.71 | 78.71 |
| CDY03367 | Canola | cytosol | 78.49 | 78.49 |
| VIT_11s0103g00200.t01 | Wine grape | cytosol | 61.42 | 60.75 |
| KRH02825 | Soybean | cytosol | 60.53 | 59.35 |
| KRH02826 | Soybean | cytosol | 57.87 | 57.36 |
| PGSC0003DMT400087784 | Potato | cytosol | 51.0 | 51.0 |
| Solyc07g015960.1.1 | Tomato | cytosol | 50.11 | 50.11 |
| AT5G48930.1 | Thale cress | cytosol | 36.59 | 38.11 |
| AT5G57840.1 | Thale cress | cytosol | 31.71 | 32.28 |
| TraesCS2D01G490400.1 | Wheat | cytosol | 27.49 | 28.12 |
| HORVU6Hr1G088530.1 | Barley | cytosol | 9.98 | 27.27 |
| TraesCS6B01G030200.1 | Wheat | cytosol | 7.98 | 27.27 |
| HORVU2Hr1G109590.1 | Barley | cytosol | 19.51 | 27.24 |
| TraesCS2A01G490000.1 | Wheat | cytosol | 26.61 | 27.21 |
| TraesCS2D01G490900.1 | Wheat | cytosol | 26.39 | 26.98 |
| TraesCS2D01G491100.1 | Wheat | cytosol | 26.39 | 26.98 |
| HORVU2Hr1G109430.2 | Barley | cytosol | 26.16 | 26.94 |
| TraesCS4A01G287700.1 | Wheat | mitochondrion | 9.31 | 26.92 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 9.31 | 26.92 |
| TraesCS6A01G375300.1 | Wheat | mitochondrion | 26.61 | 26.49 |
| Zm00001d033521_P001 | Maize | cytosol | 26.61 | 26.43 |
| TraesCS6D01G359800.1 | Wheat | peroxisome | 25.5 | 26.14 |
| TraesCS5A01G337500.1 | Wheat | cytosol | 25.06 | 26.04 |
| Zm00001d048872_P001 | Maize | cytosol | 26.61 | 25.97 |
| Os10t0380100-01 | Rice | mitochondrion | 17.29 | 25.91 |
| TraesCS5D01G342100.1 | Wheat | cytosol | 24.83 | 25.81 |
| TraesCS7A01G023200.1 | Wheat | plastid | 16.19 | 25.61 |
| HORVU5Hr1G077720.1 | Barley | mitochondrion | 24.39 | 25.23 |
| HORVU5Hr1G079580.1 | Barley | mitochondrion | 24.39 | 25.23 |
| Zm00001d021324_P001 | Maize | cytosol | 24.83 | 25.23 |
| HORVU5Hr1G084810.1 | Barley | cytosol | 23.95 | 25.17 |
| Zm00001d006263_P001 | Maize | cytosol | 24.83 | 25.17 |
| TraesCS5D01G342400.1 | Wheat | cytosol, golgi, plastid | 24.17 | 25.12 |
| OQU91195 | Sorghum | cytosol | 25.5 | 25.11 |
| OQU89853 | Sorghum | cytosol | 24.61 | 25.06 |
| Zm00001d021329_P001 | Maize | cytosol | 24.83 | 24.94 |
| TraesCS5A01G338600.1 | Wheat | cytosol | 24.39 | 24.94 |
| GSMUA_Achr4P00280_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 19.96 | 24.93 |
| HORVU5Hr1G084820.2 | Barley | cytosol | 23.95 | 24.88 |
| TraesCS5D01G342300.1 | Wheat | cytosol | 23.95 | 24.88 |
| HORVU6Hr1G088480.1 | Barley | extracellular, plasma membrane | 25.94 | 24.84 |
| TraesCS5A01G338700.1 | Wheat | cytosol | 24.17 | 24.83 |
| GSMUA_Achr11P... | Banana | cytosol | 22.84 | 24.82 |
| TraesCSU01G244500.1 | Wheat | cytosol | 9.98 | 24.73 |
| Os04t0664600-00 | Rice | cytosol | 24.61 | 24.72 |
| TraesCS5D01G342700.1 | Wheat | cytosol | 24.17 | 24.72 |
| EES10710 | Sorghum | cytosol | 25.06 | 24.67 |
| TraesCS5A01G337700.1 | Wheat | cytosol | 23.73 | 24.65 |
| TraesCS5A01G337800.1 | Wheat | cytosol | 23.73 | 24.65 |
| TraesCS5A01G337900.1 | Wheat | cytosol | 23.73 | 24.65 |
| HORVU4Hr1G077720.7 | Barley | cytosol, extracellular, peroxisome | 23.5 | 24.59 |
| Os09t0544000-01 | Rice | cytosol | 24.61 | 24.56 |
| Zm00001d003856_P001 | Maize | cytosol | 24.39 | 24.55 |
| TraesCS5A01G304000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 23.5 | 24.48 |
| TraesCS5D01G342800.1 | Wheat | cytosol | 23.73 | 24.37 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 20.84 | 24.35 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 23.95 | 24.32 |
| Os10t0379100-01 | Rice | cytosol | 23.5 | 24.31 |
| TraesCS5D01G310800.1 | Wheat | cytosol | 23.5 | 24.31 |
| Zm00001d030542_P001 | Maize | plastid | 23.73 | 24.26 |
| Os09t0543900-01 | Rice | cytosol | 23.5 | 24.26 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 20.18 | 24.2 |
| TraesCS4D01G024500.1 | Wheat | cytosol | 23.95 | 24.16 |
| TraesCS2A01G490700.1 | Wheat | plastid | 26.83 | 24.15 |
| HORVU3Hr1G027720.1 | Barley | cytosol | 6.65 | 24.0 |
| TraesCS4A01G003100.1 | Wheat | peroxisome | 23.95 | 23.95 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 18.4 | 23.92 |
| TraesCS4A01G003300.1 | Wheat | cytosol, extracellular, peroxisome | 22.84 | 23.9 |
| TraesCS4D01G300400.1 | Wheat | cytosol, extracellular, peroxisome | 22.84 | 23.9 |
| OQU83825 | Sorghum | peroxisome, plastid | 23.28 | 23.7 |
| Zm00001d022592_P001 | Maize | cytosol | 23.28 | 23.6 |
| Zm00001d048870_P001 | Maize | peroxisome | 23.73 | 23.52 |
| HORVU5Hr1G084980.1 | Barley | cytosol | 24.17 | 23.49 |
| TraesCS2D01G568200.1 | Wheat | mitochondrion | 22.39 | 23.49 |
| Zm00001d007606_P001 | Maize | peroxisome | 24.17 | 23.34 |
| HORVU4Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 23.06 | 23.27 |
| HORVU2Hr1G109470.1 | Barley | cytosol | 10.2 | 23.23 |
| TraesCS4A01G285200.1 | Wheat | cytosol | 23.95 | 23.23 |
| TraesCS4D01G359800.1 | Wheat | cytosol | 22.17 | 23.2 |
| Os04t0664500-01 | Rice | cytosol | 6.43 | 23.2 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 17.74 | 23.19 |
| HORVU2Hr1G125370.1 | Barley | cytosol | 21.95 | 23.18 |
| TraesCS4A01G003400.1 | Wheat | cytosol | 21.73 | 23.11 |
| Os12t0134700-01 | Rice | cytosol | 22.84 | 23.09 |
| TraesCS3D01G545300.1 | Wheat | cytosol | 23.06 | 23.06 |
| TraesCS1A01G088300.1 | Wheat | cytosol | 22.39 | 23.06 |
| HORVU4Hr1G077780.1 | Barley | peroxisome | 23.28 | 23.03 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 17.96 | 23.01 |
| TraesCS4A01G287500.1 | Wheat | cytosol | 23.73 | 23.01 |
| TraesCS2A01G570600.1 | Wheat | cytosol | 22.39 | 23.01 |
| HORVU2Hr1G125270.1 | Barley | peroxisome | 22.39 | 22.95 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 20.62 | 22.74 |
| TraesCS4D01G300800.1 | Wheat | cytosol, extracellular, peroxisome | 22.17 | 22.73 |
| Os11t0642400-01 | Rice | peroxisome | 22.39 | 22.7 |
| Zm00001d006260_P001 | Maize | cytosol | 20.4 | 22.66 |
| TraesCS4D01G300500.1 | Wheat | peroxisome | 22.62 | 22.62 |
| TraesCS1A01G088400.1 | Wheat | cytosol | 21.95 | 22.6 |
| TraesCS1D01G089900.1 | Wheat | cytosol | 21.95 | 22.6 |
| TraesCS2D01G581500.1 | Wheat | cytosol | 21.95 | 22.55 |
| TraesCS2D01G016600.1 | Wheat | cytosol | 23.28 | 22.48 |
| TraesCS7A01G148300.1 | Wheat | peroxisome | 22.17 | 22.47 |
| TraesCS5A01G549100.1 | Wheat | cytosol | 12.86 | 22.39 |
| Zm00001d027948_P001 | Maize | cytosol | 21.95 | 22.35 |
| Os11t0643100-01 | Rice | peroxisome | 22.17 | 22.32 |
| TraesCS2D01G582000.1 | Wheat | cytosol | 21.73 | 22.27 |
| TraesCS5A01G137500.1 | Wheat | plastid | 22.17 | 22.22 |
| Zm00001d052449_P001 | Maize | cytosol, peroxisome, plastid | 22.39 | 22.15 |
| TraesCS1D01G089600.1 | Wheat | cytosol | 21.51 | 22.15 |
| EES09214 | Sorghum | cytosol, peroxisome, plastid | 22.17 | 22.08 |
| TraesCS5D01G154500.1 | Wheat | plastid | 21.95 | 22.0 |
| Zm00001d048871_P001 | Maize | peroxisome | 22.62 | 21.98 |
| HORVU7Hr1G030410.3 | Barley | peroxisome | 22.39 | 21.86 |
| HORVU5Hr1G044390.1 | Barley | cytosol, peroxisome, plastid | 21.51 | 21.7 |
| Zm00001d027946_P001 | Maize | cytosol | 21.29 | 21.67 |
| TraesCSU01G038200.1 | Wheat | peroxisome | 21.51 | 21.6 |
| TraesCS6A01G292100.1 | Wheat | cytosol | 21.06 | 21.44 |
| HORVU1Hr1G019380.2 | Barley | cytosol, mitochondrion, plasma membrane | 21.95 | 21.34 |
| Os03t0185700-01 | Rice | cytosol, peroxisome, plasma membrane | 21.51 | 21.27 |
| EER88164 | Sorghum | cytosol | 16.19 | 21.04 |
| HORVU6Hr1G073010.3 | Barley | cytosol | 20.18 | 20.59 |
| TraesCS6D01G273300.1 | Wheat | cytosol | 20.18 | 20.54 |
| TraesCS4A01G002900.1 | Wheat | cytosol, extracellular, peroxisome | 13.75 | 20.26 |
| Os05t0116800-00 | Rice | cytosol, plastid, vacuole | 16.63 | 18.47 |
| Zm00001d030540_P001 | Maize | plastid | 11.09 | 18.32 |
| HORVU2Hr1G002500.2 | Barley | cytosol | 21.29 | 17.11 |
| HORVU2Hr1G124070.1 | Barley | cytosol | 9.31 | 14.0 |
Protein Annotations
| Gene3D:3.30.559.10 | MapMan:8.4.2 | EntrezGene:816424 | UniProt:A0A178VR29 | ProteinID:AAD12025.1 | ProteinID:AEC06845.1 |
| ArrayExpress:AT2G19070 | EnsemblPlantsGene:AT2G19070 | RefSeq:AT2G19070 | TAIR:AT2G19070 | RefSeq:AT2G19070-TAIR-G | EnsemblPlants:AT2G19070.1 |
| TAIR:AT2G19070.1 | Unigene:At.27755 | EMBL:BT002975 | EMBL:BT004456 | InterPro:CAT-like_dom_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 |
| GO:GO:0009653 | GO:GO:0009987 | GO:GO:0010584 | GO:GO:0016043 | GO:GO:0016410 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016747 | GO:GO:0080072 | GO:GO:0080073 | GO:GO:0080074 | GO:GO:0080075 |
| GO:GO:0080088 | InterPro:IPR023213 | RefSeq:NP_179497.1 | UniProt:O64470 | ProteinID:OAP08228.1 | PFAM:PF02458 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009071 |
| PO:PO:0025022 | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF57 | Symbol:SHT | InterPro:Transferase | UniParc:UPI000000BE6C |
Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
Coordinates
chr2:-:8260038..8261985
Molecular Weight (calculated)
50437.3 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.269
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.