Factsheet for Zm00001d030540_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0380100-01	Rice	mitochondrion	51.65	46.84
TraesCS7A01G023200.1	Wheat	plastid	48.72	46.67
Zm00001d030542_P001	Maize	plastid	66.3	41.04
TraesCS1B01G107500.1	Wheat	cytosol	54.58	34.02
TraesCS1A01G088400.1	Wheat	cytosol	54.58	34.02
TraesCS1B01G107300.1	Wheat	cytosol	53.85	33.87
TraesCS1D01G089900.1	Wheat	cytosol	54.21	33.79
TraesCS1A01G088300.1	Wheat	cytosol	54.21	33.79
TraesCS1B01G107400.1	Wheat	cytosol	54.21	33.79
TraesCS1D01G089600.1	Wheat	cytosol	53.85	33.56
Os10t0379100-01	Rice	cytosol	52.38	32.8
HORVU1Hr1G019380.2	Barley	cytosol, mitochondrion, plasma membrane	54.58	32.11
Zm00001d027946_P001	Maize	cytosol	49.82	30.7
Zm00001d027948_P001	Maize	cytosol	49.82	30.7
Zm00001d021329_P001	Maize	cytosol	31.87	19.38
Zm00001d006263_P001	Maize	cytosol	31.5	19.33
Zm00001d033521_P001	Maize	cytosol	31.87	19.16
Zm00001d021324_P001	Maize	cytosol	30.04	18.47
Zm00001d048872_P001	Maize	cytosol	31.14	18.4
Zm00001d022592_P001	Maize	cytosol	29.67	18.2
Zm00001d003856_P001	Maize	cytosol	29.3	17.86
Zm00001d007606_P001	Maize	peroxisome	30.04	17.56
Zm00001d048870_P001	Maize	peroxisome	28.94	17.36
KRH53324	Soybean	cytosol	15.38	17.36
Zm00001d048871_P001	Maize	peroxisome	28.94	17.03
Zm00001d006260_P001	Maize	cytosol	25.27	17.0
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	27.11	16.23
Zm00001d018367_P001	Maize	cytosol	22.34	13.8
KRH46097	Soybean	cytosol	11.36	13.72
Zm00001d020530_P001	Maize	cytosol, extracellular	20.15	12.67
Bra024450.1-P	Field mustard	cytosol	17.58	12.63
CDY56515	Canola	cytosol	17.58	12.63
CDY62143	Canola	cytosol	17.58	12.63
Zm00001d017186_P001	Maize	extracellular	20.15	12.33
Zm00001d032148_P001	Maize	cytosol	19.41	12.3
KRH06686	Soybean	peroxisome	20.51	12.04
Zm00001d020528_P001	Maize	cytosol	19.41	11.94
Zm00001d037073_P001	Maize	cytosol	19.05	11.87
Zm00001d039956_P001	Maize	peroxisome	18.68	11.75
Zm00001d045091_P001	Maize	cytosol	18.32	11.55
VIT_11s0103g00200.t01	Wine grape	cytosol	19.05	11.4
Zm00001d045092_P001	Maize	cytosol	18.32	11.36
AT2G19070.1	Thale cress	cytosol	18.32	11.09
KRH02825	Soybean	cytosol	18.32	10.87
Zm00001d050455_P001	Maize	plastid	18.68	10.78
VIT_11s0037g00570.t01	Wine grape	mitochondrion	17.22	10.56
KRG89744	Soybean	cytosol	17.95	10.56
KRH02826	Soybean	cytosol	17.58	10.55
KRG98872	Soybean	cytosol, peroxisome, plastid	17.95	10.52
KRH08423	Soybean	cytosol	17.22	10.51
KRH46095	Soybean	plastid	18.32	10.5
Zm00001d041341_P001	Maize	cytosol	15.38	10.47
KRG98873	Soybean	mitochondrion	17.58	10.39
Zm00001d039952_P002	Maize	peroxisome	16.48	10.34
Zm00001d039837_P002	Maize	peroxisome	16.12	10.3
Zm00001d039947_P002	Maize	plasma membrane	17.58	10.3
Zm00001d039840_P001	Maize	peroxisome	16.48	10.3
Zm00001d005607_P001	Maize	cytosol	16.48	10.25
KRH06685	Soybean	plastid	17.22	10.24
CDY66506	Canola	cytosol	16.12	9.95
VIT_11s0037g00580.t01	Wine grape	mitochondrion	16.48	9.85
Bra038561.1-P	Field mustard	cytosol	16.12	9.76
CDY03367	Canola	cytosol	16.12	9.76
KRH46094	Soybean	plastid	16.48	9.68
KRG98999	Soybean	mitochondrion, peroxisome, plastid	16.85	9.58
KRH46099	Soybean	cytosol, plastid	15.75	9.51
Zm00001d039833_P001	Maize	cytosol	15.38	9.4
KRH32581	Soybean	cytosol	14.29	9.07
KRG98867	Soybean	endoplasmic reticulum	15.02	9.05
KRH32575	Soybean	cytosol	14.65	8.93
KRH46098	Soybean	cytosol	14.65	8.77
KRG98866	Soybean	cytosol	14.29	8.67
Zm00001d039951_P001	Maize	nucleus	9.52	8.47
KRH30198	Soybean	cytosol	14.65	8.32
KRH30196	Soybean	cytosol	14.65	8.32
KRG98868	Soybean	cytosol	12.82	8.06
KRH13469	Soybean	cytosol	13.19	7.84
KRH70082	Soybean	cytosol	6.23	6.3
Zm00001d003129_P001	Maize	mitochondrion	1.47	2.72

Protein Annotations

EnsemblPlants:Zm00001d030540_P001	EnsemblPlants:Zm00001d030540_T001	EnsemblPlantsGene:Zm00001d030540	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF35	PFAM:PF02458	ProteinID:ONM01080.1	SEG:seg	UniParc:UPI0008445D68	UniProt:A0A1D6KCW0
MapMan:35.1	:	:	:	:	:

Description

Spermidine hydroxycinnamoyl transferase

Coordinates

chr1:-:142546785..142548741

Molecular Weight (calculated)

29935.7 Da

IEP (calculated)

9.457

GRAVY (calculated)

-0.314

Length

273 amino acids

Sequence
(BLAST)

001: MSSFYRPGPR PCAAPRQPIY RRPSPTARPI AVPRNPPVPR FDHRNIEFRG EHSSSRPYAV LPWTGSRTSA STSRSSSSPT SRPAWRPVHH VQCLLAHVWK
101: KVTAARDLAP EEFTQIRVAV NCRAAPTLRC PWILRNMVLW AFPRMQARSC CPPATPRWSA PSATPVARVD ADTSSPSSTS GHGGTRRRGA GVHAAGPGTA
201: FCPDLEVDSW LGFRFHDLDF GYGAPCAFLP PDLPVEGLMI LVPSCAAKGG VDLFMALDDD HVDAFKHICY SMD

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.