Factsheet for Zm00001d020528_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98918	Sorghum	cytosol, peroxisome, plastid	85.36	83.66
TraesCS5B01G222000.1	Wheat	plastid	75.0	76.03
TraesCS5D01G230700.1	Wheat	plastid	74.77	75.8
HORVU5Hr1G064280.1	Barley	plastid	74.1	75.11
TraesCS5A01G222900.1	Wheat	cytosol	51.35	71.25
Zm00001d045091_P001	Maize	cytosol	51.8	53.12
Zm00001d037073_P001	Maize	cytosol	51.8	52.51
Zm00001d045092_P001	Maize	cytosol	52.03	52.5
Zm00001d018367_P001	Maize	cytosol	45.27	45.48
Zm00001d032148_P001	Maize	cytosol	42.79	44.08
Zm00001d020530_P001	Maize	cytosol, extracellular	41.44	42.4
Zm00001d003129_P001	Maize	mitochondrion	13.96	42.18
Zm00001d039956_P001	Maize	peroxisome	40.54	41.47
Zm00001d039952_P002	Maize	peroxisome	38.74	39.54
Zm00001d050455_P001	Maize	plastid	41.89	39.32
Zm00001d039840_P001	Maize	peroxisome	38.29	38.9
Zm00001d039837_P002	Maize	peroxisome	37.39	38.88
Zm00001d017186_P001	Maize	extracellular	38.96	38.79
Zm00001d039833_P001	Maize	cytosol	38.96	38.7
Zm00001d039947_P002	Maize	plasma membrane	39.41	37.55
Zm00001d005607_P001	Maize	cytosol	35.36	35.76
Zm00001d041341_P001	Maize	cytosol	31.31	34.66
Zm00001d039951_P001	Maize	nucleus	22.75	32.9
Zm00001d021329_P001	Maize	cytosol	29.73	29.4
Zm00001d006263_P001	Maize	cytosol	28.83	28.76
Zm00001d033521_P001	Maize	cytosol	28.83	28.19
Zm00001d021324_P001	Maize	cytosol	28.15	28.15
Zm00001d022592_P001	Maize	cytosol	27.25	27.19
Zm00001d007606_P001	Maize	peroxisome	28.38	26.98
Zm00001d027946_P001	Maize	cytosol	26.8	26.86
Zm00001d006260_P001	Maize	cytosol	24.32	26.6
Zm00001d048870_P001	Maize	peroxisome	26.8	26.15
Zm00001d027948_P001	Maize	cytosol	25.9	25.96
Zm00001d030542_P001	Maize	plastid	25.68	25.85
Zm00001d003856_P001	Maize	cytosol	25.23	25.0
Zm00001d048872_P001	Maize	cytosol	25.9	24.89
Zm00001d048871_P001	Maize	peroxisome	25.68	24.57
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	25.0	24.34
Zm00001d030540_P001	Maize	plastid	11.94	19.41

Protein Annotations

EnsemblPlants:Zm00001d020528_P001	EnsemblPlants:Zm00001d020528_T001	EnsemblPlantsGene:Zm00001d020528	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF23	PFAM:PF02458	ProteinID:ONM55059.1	SEG:seg	SUPFAM:SSF52777	UniParc:UPI00084468AE
UniProt:A0A1D6I4J2	MapMan:50.2.3	:	:	:	:

Description

Spermidine hydroxycinnamoyl transferase

Coordinates

chr7:-:120942889..120944774

Molecular Weight (calculated)

47619.0 Da

IEP (calculated)

8.748

GRAVY (calculated)

0.076

Length

444 amino acids

Sequence
(BLAST)

001: MAVVEVVTSE LVAPSEPTPR RPLWLSNLDL AARNGYTPTI YFFRRPQDSS DGRLRADSCF STHALRAALA AALVRFYPFA GRLRAAGRGG RAEIDCNAAG
101: ALLVVARSAA ALEDFLHDFA PSKAMNDTFV PTYDSAGPDA PLLLLQVTFF RCGGVALGTA MHHFVIDGRS AFHFIRTWSS IARGDTAAAP PSLDRTPLRA
201: RPLLTTAAAL FDHTHEYGGR ASRPAAVTAG AAAGSKAEYA SAILRVTGAQ AAALRARAGA VSTFRALVAH VWRCACAARA LAHDAESRLY TMVDMRARLS
301: PPLPDAFFGN AVVRTSASAR VGDLLANPLG FGARRLRAAT GHGDEYVRSL LDYLETADLA TVPRQGLRGT DLRVISWLGM PSYDADFGWG EPALLAPALM
401: YYPGFVYLLN CPGKGGDVAV AAALEPERMQ RFKELFYEEL AMLE

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.