Factsheet for Zm00001d006260_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006263_P001	Maize	cytosol	90.89	82.92
OQU89853	Sorghum	cytosol	84.98	77.88
Zm00001d021329_P001	Maize	cytosol	83.5	75.5
Os09t0544000-01	Rice	cytosol	74.38	66.81
Zm00001d003856_P001	Maize	cytosol	67.98	61.61
Zm00001d021324_P001	Maize	cytosol	65.02	59.46
Zm00001d022592_P001	Maize	cytosol	62.81	57.3
Zm00001d033521_P001	Maize	cytosol	52.96	47.36
Solyc11g066640.1.1	Tomato	cytosol	49.51	45.79
PGSC0003DMT400001145	Potato	cytosol	49.51	45.58
GSMUA_Achr8P15170_001	Banana	cytosol	43.1	45.34
Solyc06g074710.1.1	Tomato	cytosol	49.01	44.82
PGSC0003DMT400018441	Potato	cytosol	49.01	44.72
GSMUA_Achr8P03170_001	Banana	cytosol	41.13	44.41
GSMUA_Achr8P03190_001	Banana	cytosol	37.19	43.52
Solyc11g071470.1.1	Tomato	cytosol	46.06	42.21
GSMUA_Achr8P03180_001	Banana	plastid	41.63	41.32
GSMUA_Achr8P03210_001	Banana	cytosol	35.47	40.91
GSMUA_Achr8P03200_001	Banana	cytosol	34.73	40.87
Solyc11g071480.1.1	Tomato	cytoskeleton, cytosol, peroxisome	44.58	40.86
Zm00001d048870_P001	Maize	peroxisome	41.87	37.36
Zm00001d048871_P001	Maize	peroxisome	42.36	37.07
Zm00001d007606_P001	Maize	peroxisome	42.61	37.05
PGSC0003DMT400048126	Potato	cytosol	40.15	36.14
Zm00001d048872_P001	Maize	cytosol	40.89	35.93
Zm00001d027948_P001	Maize	cytosol	36.95	33.86
Zm00001d027946_P001	Maize	cytosol	36.21	33.18
PGSC0003DMT400048130	Potato	cytoskeleton, cytosol, peroxisome	45.81	32.69
Zm00001d030542_P001	Maize	plastid	34.98	32.2
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	31.77	28.29
Zm00001d018367_P001	Maize	cytosol	28.08	25.79
Zm00001d030540_P001	Maize	plastid	17.0	25.27
VIT_11s0103g00200.t01	Wine grape	cytosol	28.33	25.22
Zm00001d020530_P001	Maize	cytosol, extracellular	26.85	25.12
Zm00001d032148_P001	Maize	cytosol	26.35	24.83
Zm00001d020528_P001	Maize	cytosol	26.6	24.32
Zm00001d045091_P001	Maize	cytosol	25.86	24.25
CDY56515	Canola	cytosol	22.66	24.21
CDY62143	Canola	cytosol	22.66	24.21
Bra024450.1-P	Field mustard	cytosol	22.41	23.95
KRH46099	Soybean	cytosol, plastid	26.6	23.89
Zm00001d017186_P001	Maize	extracellular	26.11	23.77
Zm00001d037073_P001	Maize	cytosol	25.62	23.74
KRH70082	Soybean	cytosol	15.52	23.33
Zm00001d003129_P001	Maize	mitochondrion	8.37	23.13
KRH02826	Soybean	cytosol	25.86	23.08
Zm00001d045092_P001	Maize	cytosol	24.88	22.95
KRG89744	Soybean	cytosol	25.86	22.63
KRH32575	Soybean	cytosol	24.63	22.32
KRH02825	Soybean	cytosol	25.12	22.17
KRH46097	Soybean	cytosol	12.32	22.12
KRH32581	Soybean	cytosol	23.4	22.09
KRG98873	Soybean	mitochondrion	25.12	22.08
VIT_11s0037g00570.t01	Wine grape	mitochondrion	24.14	22.02
CDY66506	Canola	cytosol	23.89	21.95
KRG98999	Soybean	mitochondrion, peroxisome, plastid	25.86	21.88
CDY03367	Canola	cytosol	23.89	21.51
VIT_11s0037g00580.t01	Wine grape	mitochondrion	24.14	21.44
Zm00001d039956_P001	Maize	peroxisome	22.91	21.43
Bra038561.1-P	Field mustard	cytosol	23.65	21.29
KRH08423	Soybean	cytosol	23.4	21.25
KRG98872	Soybean	cytosol, peroxisome, plastid	24.38	21.24
KRG98867	Soybean	endoplasmic reticulum	23.65	21.19
KRH46098	Soybean	cytosol	23.65	21.05
KRH06685	Soybean	plastid	23.65	20.91
KRH06686	Soybean	peroxisome	23.89	20.86
Zm00001d041341_P001	Maize	cytosol	20.44	20.7
KRH46094	Soybean	plastid	23.65	20.65
Zm00001d039837_P002	Maize	peroxisome	21.67	20.61
KRH46095	Soybean	plastid	24.14	20.59
AT2G19070.1	Thale cress	cytosol	22.66	20.4
Zm00001d050455_P001	Maize	plastid	23.65	20.3
Zm00001d039840_P001	Maize	peroxisome	21.43	19.91
Zm00001d039951_P001	Maize	nucleus	15.02	19.87
KRH13469	Soybean	cytosol	22.41	19.83
Zm00001d039833_P001	Maize	cytosol	21.67	19.69
Zm00001d005607_P001	Maize	cytosol	20.94	19.36
Zm00001d039952_P002	Maize	peroxisome	20.69	19.31
KRG98866	Soybean	cytosol	20.94	18.89
Zm00001d039947_P002	Maize	plasma membrane	21.43	18.67
KRG98868	Soybean	cytosol	19.7	18.43
KRH30196	Soybean	cytosol	21.67	18.3
KRH30198	Soybean	cytosol	21.67	18.3
KRH53324	Soybean	cytosol	10.1	16.94

Protein Annotations

EnsemblPlants:Zm00001d006260_P001	EnsemblPlants:Zm00001d006260_T001	EnsemblPlantsGene:Zm00001d006260	EntrezGene:103649226	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31642	PANTHER:PTHR31642:SF39	PFAM:PF02458	ProteinID:ONM23229.1	SEG:seg	UniParc:UPI00022166D9
UniProt:A0A1D6EU84	MapMan:50.2.3	:	:	:	:

Description

Spermidine hydroxycinnamoyl transferase

Coordinates

chr2:+:203038721..203039941

Molecular Weight (calculated)

43589.9 Da

IEP (calculated)

8.734

GRAVY (calculated)

-0.115

Length

406 amino acids

Sequence
(BLAST)

001: MEVKVLSSKL VKPSYPAGAP RPDTTKHVPS SVFDKATYHT QTVTIYYISP PVPSPDAIER GYATALGAYR LFAGQVRPGP DGAPGVLLND HGARLVEASV
101: DARLADIAPT KPPPAVLRLH PDLDIVEVVQ VQLTRFACGS LAVGFTANPA VADGHATSDF LVAWDRAARG LPVGPSPPVH FPPRHDPPRA GFEHRGVEYY
201: RPAPSLAHGH VHGDTTQHSI VVHKAHFTKD FVAGLRARAS EGRGRPFSRF ETILAHVWRT MTRARGLGSN PLQISTIRIS VDGRPRLAAA PAGYFGNLVL
301: WAFPRATVGS LLGRPLKHAA QAIHDAVARV DGAYDFQSFV DFAGSGTVEK EGLETTAPAQ GGRAYFPTEG MLLLVPSYIG DGSIDAIVPV FEHNLDAFKQ
401: CCYSME

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.