Factsheet for Zm00001d018367_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07672	Sorghum	cytosol	90.95	89.14
Os06t0184900-01	Rice	cytosol, peroxisome, plastid	72.62	72.13
HORVU7Hr1G030670.1	Barley	mitochondrion	73.08	70.07
GSMUA_Achr6P01940_001	Banana	cytosol, plasma membrane, plastid	55.66	56.68
GSMUA_Achr6P01960_001	Banana	cytosol, plasma membrane, plastid	43.21	56.34
Zm00001d020530_P001	Maize	cytosol, extracellular	45.7	46.54
Zm00001d020528_P001	Maize	cytosol	45.48	45.27
Zm00001d032148_P001	Maize	cytosol	44.12	45.24
Zm00001d045091_P001	Maize	cytosol	43.67	44.57
Zm00001d039956_P001	Maize	peroxisome	42.99	43.78
Zm00001d045092_P001	Maize	cytosol	43.44	43.64
Zm00001d037073_P001	Maize	cytosol	42.76	43.15
Zm00001d003129_P001	Maize	mitochondrion	14.25	42.86
Zm00001d039952_P002	Maize	peroxisome	41.63	42.3
Zm00001d039837_P002	Maize	peroxisome	39.82	41.22
Zm00001d039840_P001	Maize	peroxisome	40.5	40.96
Zm00001d039947_P002	Maize	plasma membrane	42.99	40.77
Zm00001d017186_P001	Maize	extracellular	39.82	39.46
Zm00001d039833_P001	Maize	cytosol	39.59	39.15
Zm00001d050455_P001	Maize	plastid	40.27	37.63
Zm00001d039951_P001	Maize	nucleus	25.34	36.48
Zm00001d005607_P001	Maize	cytosol	34.84	35.08
Zm00001d041341_P001	Maize	cytosol	31.0	34.16
Zm00001d033521_P001	Maize	cytosol	32.13	31.28
Zm00001d006263_P001	Maize	cytosol	29.19	28.99
Zm00001d021329_P001	Maize	cytosol	29.19	28.73
Zm00001d021324_P001	Maize	cytosol	28.51	28.38
Zm00001d006260_P001	Maize	cytosol	25.79	28.08
Zm00001d048870_P001	Maize	peroxisome	28.73	27.91
Zm00001d007606_P001	Maize	peroxisome	28.96	27.41
Zm00001d048872_P001	Maize	cytosol	28.51	27.27
Zm00001d027946_P001	Maize	cytosol	26.92	26.86
Zm00001d022592_P001	Maize	cytosol	26.92	26.74
Zm00001d027948_P001	Maize	cytosol	26.47	26.41
Zm00001d030542_P001	Maize	plastid	25.79	25.85
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	26.47	25.66
Zm00001d003856_P001	Maize	cytosol	25.79	25.45
Zm00001d048871_P001	Maize	peroxisome	26.24	25.0
Zm00001d030540_P001	Maize	plastid	13.8	22.34

Protein Annotations

EMBL:BT065849	EnsemblPlants:Zm00001d018367_P001	EnsemblPlants:Zm00001d018367_T001	EnsemblPlantsGene:Zm00001d018367	EntrezGene:100382972	Gene3D:3.30.559.10
GO:GO:0003674	GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	GO:GO:0050734	InterPro:CAT-like_dom_sf
InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF15	PFAM:PF02458	ProteinID:AQK75734.1
UniParc:UPI000194B4B0	UniProt:C0PC30	MapMan:50.2.3	:	:	:

Description

Spermidine hydroxycinnamoyl transferase

Coordinates

chr5:-:219274877..219276542

Molecular Weight (calculated)

47245.6 Da

IEP (calculated)

5.301

GRAVY (calculated)

0.008

Length

442 amino acids

Sequence
(BLAST)

001: MEVEILESCM VKPSDDIGTP PPPMHVVWLS NLDLLVARSH TPTVYVYRPS PDPDFFSPGV LSAALSKALV RFYPLAGRLA QDGAGRPQIH CTGEGALLVT
101: ARADATLQDI PGGFAPSDEL RQMLVPSAAD GEDRAGILAM FQVTSFKCGG VCVGAAIHHT AADGLAALDF VNTWAAIASK GVDEAAPAPR PWLDRTLLRA
201: RSPPDVRFDH SEYSPRGGGG PKTARVPFDS AILPMSKTQV DALRAGKKVS TFKAVVAHVW RCACIARGLA GDEDTRLYMT ADARSRVRPP LPEGYLGNAI
301: FRASAVATAG DVVSEQLDAV AGRVSGATAR LDDEYVRSLV DYLEQVVGDV AGLRKGEWVM PETDLWVISW QGLPIYDADF GWGRPAFMGR ACLQFSGLVY
401: LVPGPDGDGR LDVVVAMEPK SLARFKELLY ELKGAGVPCT AD

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.