Factsheet for Zm00001d017186_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05411	Sorghum	cytosol	96.64	96.21
Os02t0611800-01	Rice	plasma membrane	84.75	85.52
TraesCS6D01G203000.1	Wheat	cytosol	83.86	84.62
TraesCS6A01G232200.1	Wheat	cytosol	83.86	84.62
HORVU6Hr1G056230.2	Barley	cytosol	83.41	84.35
TraesCS6B01G249400.1	Wheat	cytosol, golgi	83.41	84.35
Zm00001d003129_P001	Maize	mitochondrion	26.23	79.59
GSMUA_Achr4P01990_001	Banana	mitochondrion	69.06	70.64
CDY05770	Canola	cytosol	64.13	66.05
VIT_09s0018g01190.t01	Wine grape	cytosol	63.45	65.97
CDY31956	Canola	cytosol	63.9	65.82
Bra036480.1-P	Field mustard	cytosol, peroxisome, plastid	62.56	65.8
AT5G48930.1	Thale cress	cytosol	63.0	64.9
KRH44584	Soybean	cytosol	61.88	64.34
PGSC0003DMT400036695	Potato	cytosol	61.21	64.08
Solyc03g117600.2.1	Tomato	cytosol, extracellular	62.11	63.68
KRH23680	Soybean	cytosol, nucleus	62.11	63.1
KRH09635	Soybean	cytosol	51.12	60.96
CDY44162	Canola	plastid	57.62	60.05
CDY22880	Canola	mitochondrion	57.4	59.81
Bra033526.1-P	Field mustard	mitochondrion	57.4	59.81
KRH47315	Soybean	endoplasmic reticulum	61.66	59.14
Zm00001d020530_P001	Maize	cytosol, extracellular	39.91	41.01
Zm00001d018367_P001	Maize	cytosol	39.46	39.82
Zm00001d020528_P001	Maize	cytosol	38.79	38.96
Zm00001d032148_P001	Maize	cytosol	37.0	38.28
Zm00001d045092_P001	Maize	cytosol	37.44	37.95
Zm00001d045091_P001	Maize	cytosol	35.87	36.95
Zm00001d039837_P002	Maize	peroxisome	35.2	36.77
Zm00001d037073_P001	Maize	cytosol	36.1	36.76
Zm00001d039956_P001	Maize	peroxisome	34.75	35.71
Zm00001d039840_P001	Maize	peroxisome	34.75	35.47
Zm00001d039952_P002	Maize	peroxisome	34.53	35.4
Zm00001d039833_P001	Maize	cytosol	33.86	33.78
Zm00001d005607_P001	Maize	cytosol	32.96	33.49
Zm00001d050455_P001	Maize	plastid	35.43	33.4
Zm00001d039947_P002	Maize	plasma membrane	34.53	33.05
Zm00001d041341_P001	Maize	cytosol	27.58	30.67
Zm00001d039951_P001	Maize	nucleus	20.63	29.97
Zm00001d033521_P001	Maize	cytosol	29.82	29.3
Zm00001d048870_P001	Maize	peroxisome	28.7	28.13
Zm00001d048872_P001	Maize	cytosol	28.7	27.71
Zm00001d021324_P001	Maize	cytosol	27.58	27.7
Zm00001d006263_P001	Maize	cytosol	27.58	27.64
Zm00001d007606_P001	Maize	peroxisome	28.48	27.19
Zm00001d021329_P001	Maize	cytosol	27.35	27.17
Zm00001d048871_P001	Maize	peroxisome	28.03	26.94
Zm00001d022592_P001	Maize	cytosol	26.68	26.74
Zm00001d006260_P001	Maize	cytosol	23.77	26.11
Zm00001d003856_P001	Maize	cytosol	25.78	25.67
Zm00001d027946_P001	Maize	cytosol	24.89	25.06
Zm00001d030542_P001	Maize	plastid	24.66	24.94
Zm00001d027948_P001	Maize	cytosol	24.66	24.83
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	24.44	23.9
Zm00001d030540_P001	Maize	plastid	12.33	20.15

Protein Annotations

EntrezGene:100194386	MapMan:21.6.1.1	Gene3D:3.30.559.10	ProteinID:AQK72540.1	ProteinID:AQK72541.1	UniProt:B4FII0
EMBL:BT036918	EMBL:BT039231	EMBL:BT087822	InterPro:CAT-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:IPR023213	PFAM:PF02458	PANTHER:PTHR31642	PANTHER:PTHR31642:SF116
SUPFAM:SSF52777	InterPro:Transferase	UniParc:UPI000160BCDE	EnsemblPlantsGene:Zm00001d017186	EnsemblPlants:Zm00001d017186_P001	EnsemblPlants:Zm00001d017186_T001
SEG:seg	:	:	:	:	:

Description

hydroxycinnamoyltransferase6Shikimate O-hydroxycinnamoyltransferase

Coordinates

chr5:-:188273103..188277905

Molecular Weight (calculated)

48624.2 Da

IEP (calculated)

6.352

GRAVY (calculated)

-0.046

Length

446 amino acids

Sequence
(BLAST)

001: MKITVRGSEM VYPAAETPRR RLWNSGPDLV VPRFHTPSVY FFRREDADGN DLAGADGSFF DGARMRRALA EALVPFYPMA GRLARDEDGR VEIDCNAGGV
101: LFQEADAPDA TIDYFGDFAP TMELKRLIPT VDFTDDISSF PLLVLQVTHF KCGGVAIGVG MQHHVADGFS GLHFINSWAD LCRGVPIAVM PFIDRSLLRA
201: RDPPTPAYPH IEYQPAPAML SEPPQAALTS KPATPPTAVA IFKLSRAELV RLRSQVPARE GAPRFSTYAV LAAHVWRCAS LARGLPADQP TKLYCATDGR
301: QRLQPPLPEG YFGNVIFTAT PLANAGTVTA GVAEGASVIQ AALDRMDDGY CRSALDYLEL QPDLSALVRG AHTFRCPNLG LTSWVRLPIH DADFGWGRPV
401: FMGPGGIAYE GLAFVLPSAN RDGSLSVAIS LQAEHMEKFR KLIYDF

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.