Factsheet for Bra033526.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22880	Canola	mitochondrion	99.77	99.77
Bra036480.1-P	Field mustard	cytosol, peroxisome, plastid	81.54	82.31
AT5G48930.1	Thale cress	cytosol	81.07	80.14
VIT_09s0018g01190.t01	Wine grape	cytosol	71.73	71.56
Solyc03g117600.2.1	Tomato	cytosol, extracellular	69.63	68.51
KRH44584	Soybean	cytosol	68.46	68.3
PGSC0003DMT400036695	Potato	cytosol	67.76	68.08
KRH23680	Soybean	cytosol, nucleus	67.99	66.29
KRH47315	Soybean	endoplasmic reticulum	68.93	63.44
KRH09635	Soybean	cytosol	55.14	63.1
GSMUA_Achr5P04550_001	Banana	cytosol	60.98	62.29
GSMUA_Achr4P01990_001	Banana	mitochondrion	61.92	60.78
GSMUA_Achr10P...	Banana	mitochondrion	61.68	60.0
Os04t0500700-02	Rice	mitochondrion	60.51	58.6
EES11073	Sorghum	mitochondrion	60.28	58.5
TraesCS2D01G354300.1	Wheat	mitochondrion	59.81	58.45
TraesCS2B01G374600.1	Wheat	mitochondrion	59.35	57.99
TraesCS2A01G354500.1	Wheat	mitochondrion	59.58	57.69
Os02t0611800-01	Rice	plasma membrane	59.58	57.69
Zm00001d017186_P001	Maize	extracellular	59.81	57.4
EES05411	Sorghum	cytosol	59.81	57.14
TraesCS6B01G249400.1	Wheat	cytosol, golgi	58.64	56.92
TraesCS6D01G203000.1	Wheat	cytosol	58.64	56.79
TraesCS6A01G232200.1	Wheat	cytosol	58.64	56.79
HORVU6Hr1G056230.2	Barley	cytosol	58.41	56.69
Zm00001d003129_P001	Maize	mitochondrion	18.93	55.1
TraesCS1D01G021600.1	Wheat	mitochondrion	56.54	54.88
TraesCS3B01G002000.1	Wheat	mitochondrion	55.84	54.82
HORVU1Hr1G081430.3	Barley	cytosol, peroxisome, plastid	48.36	54.33
TraesCS3D01G525000.1	Wheat	mitochondrion	55.84	54.07
TraesCS3A01G517500.1	Wheat	mitochondrion	56.07	53.81
TraesCS1B01G005300.1	Wheat	mitochondrion	44.16	47.49
HORVU2Hr1G086380.1	Barley	cytosol, nucleus, plastid	59.58	43.81
Bra006796.1-P	Field mustard	cytosol, golgi, nucleus	44.16	42.19
Bra006797.1-P	Field mustard	cytosol	42.06	40.63
Bra024450.1-P	Field mustard	cytosol	33.41	37.63
Bra038561.1-P	Field mustard	cytosol	36.92	35.03

Protein Annotations

EnsemblPlants:Bra033526.1	EnsemblPlants:Bra033526.1-P	EnsemblPlantsGene:Bra033526	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF118	PFAM:PF02458	UniParc:UPI00025448BF	UniProt:M4EXI9	MapMan:21.6.1.1	:

Description

AT5G48930 (E=1e-209) HCT | HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE); quinate O-hydroxycinnamoyltransferase/ shikimate O-hydroxycinnamoyltransferase/ transferase

Coordinates

chrA01:-:11359800..11361239

Molecular Weight (calculated)

47432.8 Da

IEP (calculated)

6.890

GRAVY (calculated)

-0.024

Length

428 amino acids

Sequence
(BLAST)

001: MKINTRNATM VRPAAETPST YLWNSNVDLI IARYHSSSVY FYRPNGASNF FDPHVLKEAL AKALVPFYPF AGSLRRDENG RIEIDCNAAG ALFIVADTPS
101: VIDDLGDFAP SVNLSKLVPH VDYSPGIHTF PLLVLQVTFF KCGGVSLGVG IQHHVSDGLS SIHFINSWSD MARGLDLTLP PFIDRTLLRA REPPHPTFHH
201: VEYQPSPSMK IPLHPDNTTV SIFKLSRDLL VALKAKAKED GNTVSYSSYE TLAAHVWRSV TKARAFPDDQ VTKLYIATDG RSRLRPQLPP GYLGNVVFTA
301: TPLAAAGDLL SKPTSYVAGL IHDVLARMDD EYLRSALDYL EMQPDLSALI RGAQTYNCPN LGITSWVRLP IYDADFGWGR PVFMGPSVIA FEGLSFVLPS
401: PTNDGSLSLF IALRTEHMKL FEKYLYEI

Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)

001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI

Arabidopsis Description

HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.