Factsheet for Bra006797.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002826.1-P
Bra028938.1-P
Bra035613.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57840.1	Bra002826.1-P	AT5G56290.1	21798944
AT5G57840.1	Bra028938.1-P	AT5G56290.1	21798944
AT5G57840.1	Bra035613.1-P	AT5G56290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88644	Canola	cytosol	98.19	97.97
Bra006796.1-P	Field mustard	cytosol, golgi, nucleus	86.0	85.04
AT5G57840.1	Thale cress	cytosol	77.88	77.88
PGSC0003DMT400029079	Potato	cytosol	36.57	45.0
Solyc07g005760.2.1	Tomato	cytosol	43.57	44.88
VIT_11s0037g00440.t01	Wine grape	cytosol	41.31	42.26
Bra033526.1-P	Field mustard	mitochondrion	40.63	42.06
Bra036480.1-P	Field mustard	cytosol, peroxisome, plastid	39.95	41.75
Bra024450.1-P	Field mustard	cytosol	27.31	31.84
Bra038561.1-P	Field mustard	cytosol	31.6	31.04

Protein Annotations

EnsemblPlants:Bra006797.1	EnsemblPlants:Bra006797.1-P	EnsemblPlantsGene:Bra006797	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF66	PFAM:PF02458	UniParc:UPI000254038A	UniProt:M4CRF6	MapMan:50.2.3	:

Description

AT5G57840 (E=1e-204) | transferase family protein

Coordinates

chrA03:+:5074609..5076174

Molecular Weight (calculated)

49856.3 Da

IEP (calculated)

7.366

GRAVY (calculated)

-0.088

Length

443 amino acids

Sequence
(BLAST)

001: MKIHVKQATI VKPAEETPVH NLWLSNLDLI QVRFHMGILY FYNSSPSFTL PNTQSLIDAL RKVLVLFYPA AGRLQKNKNG RLEVLCNGEG VLLVEAETDS
101: TLQDIGLFNQ SLDLSQLMPT LDYSGDISSV PLILLQVTYF KCGAICIGNS IHHTFGDAGS LVCFMEAWSR TARGLPVKVS PFFDRTILRA RDPPSPVFPH
201: TEYKPPPFHN PPVESLAYRS NPDSDSGVVS LKLTRLQVKA LRAKAEVADS MFSTYELLVA HIWRCACFAN EDLGEEHLTR LHIIIDGRSR LQPKLPQGYI
301: GNTLFHARPI SLLGEFRREP FSTTVKRVHE EIKKMDNEYL RSAIDSLETH PDLDQLVPGE GNPIFSCAAN FCIVGLPKQT VYELDFGWGR PFFKRTSHMN
401: EGKGFVGMSL DEEGSFIVFM CLKKTQLGKF QKLFFEFLNV SAL

Best Arabidopsis Sequence Match ( AT5G57840.1 )
(BLAST)

001: MKIRVKQATI VKPAEETPTH NLWLSNLDLI QVRLHMGTLY FYKPCSSSDR PNTQSLIEAL SKVLVFFYPA AGRLQKNTNG RLEVQCNGEG VLFVEAESDS
101: TVQDIGLLTQ SLDLSQLVPT VDYAGDISSY PLLLFQVTYF KCGTICVGSS IHHTFGEATS LGYIMEAWSL TARGLLVKLT PFLDRTVLHA RNPPSSVFPH
201: TEYQSPPFHN HPMKSLAYRS NPESDSAIAT LKLTRLQLKA LKARAEIADS KFSTYEVLVA HTWRCASFAN EDLSEEHSTR LHIIIDGRPR LQPKLPQGYI
301: GNTLFHARPV SPLGAFHRES FSETVERVHR EIRKMDNEYL RSAIDYLERH PDLDQLVPGE GNTIFSCAAN FCIVSLIKQT AYEMDFGWGK AYYKRASHLN
401: EGKGFVTGNP DEEGSMMLTM CLKKTQLSKF RKLFYEFLNV SAL

Arabidopsis Description

AT5g57840/MTI20_9 [Source:UniProtKB/TrEMBL;Acc:Q9FJN0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.