Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09214 | Sorghum | cytosol, peroxisome, plastid | 86.18 | 86.75 |
| Os12t0134700-01 | Rice | cytosol | 65.35 | 66.82 |
| TraesCS5A01G137500.1 | Wheat | plastid | 64.25 | 65.11 |
| TraesCS5D01G154500.1 | Wheat | plastid | 64.25 | 65.11 |
| TraesCS5B01G136200.1 | Wheat | plastid | 61.84 | 64.68 |
| HORVU5Hr1G044390.1 | Barley | cytosol, peroxisome, plastid | 63.38 | 64.65 |
| GSMUA_Achr4P00280_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 34.43 | 43.49 |
| GSMUA_Achr11P... | Banana | cytosol | 39.25 | 43.13 |
| Zm00001d027948_P001 | Maize | cytosol | 35.31 | 36.34 |
| Zm00001d030542_P001 | Maize | plastid | 34.21 | 35.37 |
| Zm00001d027946_P001 | Maize | cytosol | 34.21 | 35.21 |
| Zm00001d033521_P001 | Maize | cytosol | 34.65 | 34.8 |
| Zm00001d021324_P001 | Maize | cytosol | 32.02 | 32.88 |
| Zm00001d006263_P001 | Maize | cytosol | 31.8 | 32.58 |
| Zm00001d022592_P001 | Maize | cytosol | 31.58 | 32.36 |
| Zm00001d021329_P001 | Maize | cytosol | 31.58 | 32.07 |
| Zm00001d006260_P001 | Maize | cytosol | 28.29 | 31.77 |
| Zm00001d007606_P001 | Maize | peroxisome | 32.02 | 31.26 |
| Zm00001d048870_P001 | Maize | peroxisome | 30.92 | 30.99 |
| Zm00001d003856_P001 | Maize | cytosol | 30.26 | 30.8 |
| Zm00001d048871_P001 | Maize | peroxisome | 30.48 | 29.96 |
| Zm00001d048872_P001 | Maize | cytosol | 30.04 | 29.65 |
| Zm00001d030540_P001 | Maize | plastid | 16.23 | 27.11 |
| Zm00001d018367_P001 | Maize | cytosol | 25.66 | 26.47 |
| Zm00001d039837_P002 | Maize | peroxisome | 23.46 | 25.06 |
| Zm00001d020528_P001 | Maize | cytosol | 24.34 | 25.0 |
| Zm00001d037073_P001 | Maize | cytosol | 23.9 | 24.89 |
| Zm00001d045092_P001 | Maize | cytosol | 23.9 | 24.77 |
| Zm00001d039840_P001 | Maize | peroxisome | 23.68 | 24.71 |
| Zm00001d003129_P001 | Maize | mitochondrion | 7.89 | 24.49 |
| Zm00001d017186_P001 | Maize | extracellular | 23.9 | 24.44 |
| Zm00001d039956_P001 | Maize | peroxisome | 23.25 | 24.42 |
| Zm00001d020530_P001 | Maize | cytosol, extracellular | 23.03 | 24.19 |
| VIT_11s0103g00200.t01 | Wine grape | cytosol | 23.9 | 23.9 |
| Zm00001d045091_P001 | Maize | cytosol | 22.59 | 23.79 |
| KRH02826 | Soybean | cytosol | 23.68 | 23.74 |
| KRH02825 | Soybean | cytosol | 23.9 | 23.7 |
| Zm00001d039952_P002 | Maize | peroxisome | 22.59 | 23.68 |
| Zm00001d032148_P001 | Maize | cytosol | 22.37 | 23.67 |
| Zm00001d039833_P001 | Maize | cytosol | 22.81 | 23.27 |
| KRH46097 | Soybean | cytosol | 11.4 | 23.01 |
| Bra024450.1-P | Field mustard | cytosol | 19.08 | 22.89 |
| CDY56515 | Canola | cytosol | 19.08 | 22.89 |
| CDY62143 | Canola | cytosol | 19.08 | 22.89 |
| Zm00001d039947_P002 | Maize | plasma membrane | 23.03 | 22.53 |
| AT2G19070.1 | Thale cress | cytosol | 22.15 | 22.39 |
| CDY66506 | Canola | cytosol | 21.49 | 22.17 |
| VIT_11s0037g00570.t01 | Wine grape | mitochondrion | 21.49 | 22.02 |
| Zm00001d005607_P001 | Maize | cytosol | 21.05 | 21.87 |
| Zm00001d041341_P001 | Maize | cytosol | 19.08 | 21.7 |
| Bra038561.1-P | Field mustard | cytosol | 21.27 | 21.51 |
| CDY03367 | Canola | cytosol | 21.27 | 21.51 |
| VIT_11s0037g00580.t01 | Wine grape | mitochondrion | 21.49 | 21.44 |
| Zm00001d050455_P001 | Maize | plastid | 21.93 | 21.14 |
| KRH70082 | Soybean | cytosol | 12.5 | 21.11 |
| KRG98867 | Soybean | endoplasmic reticulum | 20.83 | 20.97 |
| KRG89744 | Soybean | cytosol | 21.27 | 20.91 |
| KRH32575 | Soybean | cytosol | 20.39 | 20.76 |
| Zm00001d039951_P001 | Maize | nucleus | 13.82 | 20.52 |
| KRH32581 | Soybean | cytosol | 19.3 | 20.47 |
| KRG98872 | Soybean | cytosol, peroxisome, plastid | 20.83 | 20.39 |
| KRH06685 | Soybean | plastid | 20.39 | 20.26 |
| KRH08423 | Soybean | cytosol | 19.74 | 20.13 |
| KRH46099 | Soybean | cytosol, plastid | 19.96 | 20.13 |
| KRG98873 | Soybean | mitochondrion | 20.39 | 20.13 |
| KRH13469 | Soybean | cytosol | 19.96 | 19.83 |
| KRH46094 | Soybean | plastid | 20.18 | 19.78 |
| KRH46095 | Soybean | plastid | 20.39 | 19.54 |
| KRG98866 | Soybean | cytosol | 19.08 | 19.33 |
| KRG98999 | Soybean | mitochondrion, peroxisome, plastid | 19.96 | 18.96 |
| KRH06686 | Soybean | peroxisome | 19.3 | 18.92 |
| KRH46098 | Soybean | cytosol | 18.86 | 18.86 |
| KRH30198 | Soybean | cytosol | 19.08 | 18.09 |
| KRH30196 | Soybean | cytosol | 19.08 | 18.09 |
| KRG98868 | Soybean | cytosol | 16.89 | 17.74 |
| KRH53324 | Soybean | cytosol | 9.21 | 17.36 |
Protein Annotations
| EntrezGene:103654324 | Gene3D:3.30.559.10 | MapMan:50.2.3 | ProteinID:AQK57262.1 | InterPro:CAT-like_dom_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR023213 | UniProt:K7UB05 | PFAM:PF02458 |
| PANTHER:PTHR31642 | PANTHER:PTHR31642:SF53 | SUPFAM:SSF52777 | InterPro:Transferase | UniParc:UPI000220F8D4 | EnsemblPlantsGene:Zm00001d052449 |
| EnsemblPlants:Zm00001d052449_P001 | EnsemblPlants:Zm00001d052449_T001 | SEG:seg | : | : | : |
Description
Spermidine hydroxycinnamoyl transferase
Coordinates
chr4:-:190297943..190299313
Molecular Weight (calculated)
48385.8 Da
IEP (calculated)
6.456
GRAVY (calculated)
0.083
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVQVQRSFV IPAPQSEPSA EVPLTVFDLV APAYHVTVLF AYAAPNPTDA ALLDALAATL PRFPLLTARL VVADADERRR PFFVTGRGGA GALVVEATVA
101: SALSDHLPLA PAPELARLHV PVGGDVAPPP PHMLMLQINR FACGGLVIAS SSYHQAADGY SMSTFFHAWA DAVRANNKHD TLLPAAPPAP APYGPGAITP
201: RRPPRCEFEH RGTEFLRAED AAAGRPAPAR VDPSEIANVL LHLPSDFVAA LKASAAPPQG QGRWYTTFEA VSAHLWRKIT LARGRADDAS RTALNAAVNG
301: RARLGADALA RGFFGNAVLT ASAATCARDL ARGALADAAA LIRAAVRARD RQYFQSFVDF GELHLHGGEE LLEPTVGDED NVLLPDVASD SWLHLELHRL
401: DFGCGGRLAG ILPAKVPLDG VVVLIPSLRK GGGVDAFVAL WDKHAKELMD IAYTMD
101: SALSDHLPLA PAPELARLHV PVGGDVAPPP PHMLMLQINR FACGGLVIAS SSYHQAADGY SMSTFFHAWA DAVRANNKHD TLLPAAPPAP APYGPGAITP
201: RRPPRCEFEH RGTEFLRAED AAAGRPAPAR VDPSEIANVL LHLPSDFVAA LKASAAPPQG QGRWYTTFEA VSAHLWRKIT LARGRADDAS RTALNAAVNG
301: RARLGADALA RGFFGNAVLT ASAATCARDL ARGALADAAA LIRAAVRARD RQYFQSFVDF GELHLHGGEE LLEPTVGDED NVLLPDVASD SWLHLELHRL
401: DFGCGGRLAG ILPAKVPLDG VVVLIPSLRK GGGVDAFVAL WDKHAKELMD IAYTMD
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.