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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plastid 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d052449_P001 Maize cytosol, peroxisome, plastid 86.75 86.18
TraesCS5D01G154500.1 Wheat plastid 67.11 67.56
Os12t0134700-01 Rice cytosol 66.45 67.49
TraesCS5A01G137500.1 Wheat plastid 66.67 67.11
HORVU5Hr1G044390.1 Barley cytosol, peroxisome, plastid 65.78 66.67
TraesCS5B01G136200.1 Wheat plastid 63.13 65.6
GSMUA_Achr4P00280_001 Banana cytosol, endoplasmic reticulum, peroxisome 36.42 45.71
GSMUA_Achr11P... Banana cytosol 41.28 45.06
OQU91195 Sorghum cytosol 35.76 35.37
OQU89853 Sorghum cytosol 31.57 32.28
EES10710 Sorghum cytosol 30.46 30.13
OQU83825 Sorghum peroxisome, plastid 29.36 30.02
EER88164 Sorghum cytosol 20.09 26.22
EER98920 Sorghum cytosol 24.28 25.4
VIT_11s0103g00200.t01 Wine grape cytosol 24.94 24.78
EES07672 Sorghum cytosol 24.5 24.61
EER87979 Sorghum cytosol 23.4 24.37
KXG19490 Sorghum cytosol 23.4 24.37
EER98918 Sorghum cytosol, peroxisome, plastid 24.28 24.28
EES05411 Sorghum cytosol 23.62 23.88
KXG31859 Sorghum peroxisome 22.74 23.57
EES11073 Sorghum mitochondrion 22.74 23.36
EER89344 Sorghum cytosol 22.52 23.34
KXG31953 Sorghum cytosol, endoplasmic reticulum, peroxisome 22.3 23.27
KXG31858 Sorghum peroxisome 22.08 23.15
EES15064 Sorghum cytosol 22.52 23.02
OQU75613 Sorghum cytosol, peroxisome, plastid 22.08 22.94
KXG31860 Sorghum cytosol, peroxisome, plastid 22.08 22.94
KRH02826 Soybean cytosol 22.96 22.86
KXG31861 Sorghum cytosol, peroxisome, plastid 22.08 22.73
KXG31952 Sorghum cytosol 20.75 22.65
Bra024450.1-P Field mustard cytosol 18.98 22.63
CDY62143 Canola cytosol 18.98 22.63
CDY56515 Canola cytosol 18.98 22.63
KRH02825 Soybean cytosol 22.74 22.39
AT2G19070.1 Thale cress cytosol 22.08 22.17
EES15065 Sorghum cytosol, peroxisome, plastid 21.63 21.97
KRH70082 Soybean cytosol 13.02 21.85
VIT_11s0037g00570.t01 Wine grape mitochondrion 21.41 21.8
EES02456 Sorghum cytosol, peroxisome, plastid 21.63 21.63
CDY66506 Canola cytosol 20.97 21.49
KRH46097 Soybean cytosol 10.6 21.24
EER96600 Sorghum peroxisome 20.31 21.15
EES02467 Sorghum cytosol, peroxisome, plastid 20.75 21.03
VIT_11s0037g00580.t01 Wine grape mitochondrion 21.19 21.01
KRG98867 Soybean endoplasmic reticulum 20.97 20.97
Bra038561.1-P Field mustard cytosol 20.75 20.84
CDY03367 Canola cytosol 20.75 20.84
KRH06685 Soybean plastid 20.97 20.7
OQU86302 Sorghum mitochondrion 11.04 20.41
KRG98872 Soybean cytosol, peroxisome, plastid 20.97 20.39
KRG89744 Soybean cytosol 20.75 20.26
KRH32575 Soybean cytosol 19.87 20.09
KXG31863 Sorghum plastid 16.34 19.79
KRG98873 Soybean mitochondrion 20.09 19.7
KRH46099 Soybean cytosol, plastid 19.65 19.69
KRH08423 Soybean cytosol 19.43 19.69
KRH32581 Soybean cytosol 18.54 19.53
KRH13469 Soybean cytosol 19.65 19.39
KRH46094 Soybean plastid 19.65 19.14
KRH46095 Soybean plastid 20.09 19.12
KRH06686 Soybean peroxisome 19.21 18.71
KRG98866 Soybean cytosol 18.54 18.67
KRH46098 Soybean cytosol 18.76 18.64
KRG98999 Soybean mitochondrion, peroxisome, plastid 19.21 18.12
KRH53324 Soybean cytosol 9.49 17.77
KRH30198 Soybean cytosol 18.54 17.46
KRH30196 Soybean cytosol 18.54 17.46
KRG98868 Soybean cytosol 16.56 17.28
Protein Annotations
EnsemblPlants:EES09214EnsemblPlantsGene:SORBI_3005G026300Gene3D:3.30.559.10GO:GO:0003674GO:GO:0003824GO:GO:0016740
GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31642PANTHER:PTHR31642:SF53
PFAM:PF02458ProteinID:EES09214ProteinID:EES09214.2SEG:segSUPFAM:SSF52777UniParc:UPI00081AD1F6
UniProt:C5Y436MapMan:50.2.3::::
Description
hypothetical protein
Coordinates
chr5:-:2365847..2367392
Molecular Weight (calculated)
48005.6 Da
IEP (calculated)
7.115
GRAVY (calculated)
0.068
Length
453 amino acids
Sequence
(BLAST)
001: MDVQVQRTFV IPAPASEPSA EVPLTVFDLV APTYHVTVLF AYTAPNPTNA ALLDALAATL PRFPLLTARL VAGAGHRRRR PFFVTGKGGA GALVVEATVP
101: SALSDHLPLA PAPELASLHV PVPAPPPQHL LMLQINRFAC GGLVVATSAH HQAADGYSMS TFFHAWADAV RATNNNTGGG LLPPPAPYGP SAIVPRRPPR
201: CEFEHRGTEF LRAEDAAAGK PAPVRVDPSE IANVLLHLPS EFVAGLKQAA ATAPQQMMSR PPYTTFETVS AHLWRKITLA RGRADDASRT ALNAAVNGRA
301: RLAGADEAVA RGFFGNVVLT ASAATSARDL ARGTLGDAAA LVRAGVRARD RHYFQSFIDF GELHGGEELE PTVGDDDNVL LPDVASDSWL HLELHRLDFG
401: CGGRLAGILP AKVPLDGVVV LIPSLRKGGG VDVFVALWEK HAKELMNIAY TMD
Best Arabidopsis Sequence Match ( AT5G48930.1 )
(BLAST)
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.