Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG19490 | Sorghum | cytosol | 100.0 | 100.0 |
Zm00001d045092_P001 | Maize | cytosol | 91.72 | 90.68 |
EER89344 | Sorghum | cytosol | 77.47 | 77.12 |
EER98918 | Sorghum | cytosol, peroxisome, plastid | 52.87 | 50.77 |
EES07672 | Sorghum | cytosol | 43.68 | 42.13 |
EER98920 | Sorghum | cytosol | 41.61 | 41.8 |
KXG31953 | Sorghum | cytosol, endoplasmic reticulum, peroxisome | 40.69 | 40.78 |
EES15064 | Sorghum | cytosol | 40.23 | 39.5 |
EER96600 | Sorghum | peroxisome | 38.85 | 38.85 |
EES15065 | Sorghum | cytosol, peroxisome, plastid | 38.85 | 37.89 |
EES02456 | Sorghum | cytosol, peroxisome, plastid | 39.08 | 37.53 |
OQU75613 | Sorghum | cytosol, peroxisome, plastid | 37.47 | 37.39 |
KXG31860 | Sorghum | cytosol, peroxisome, plastid | 37.47 | 37.39 |
KXG31859 | Sorghum | peroxisome | 37.47 | 37.3 |
KXG31858 | Sorghum | peroxisome | 37.01 | 37.27 |
KXG31952 | Sorghum | cytosol | 35.4 | 37.11 |
KXG31861 | Sorghum | cytosol, peroxisome, plastid | 37.47 | 37.05 |
EES11073 | Sorghum | mitochondrion | 37.24 | 36.73 |
EES05411 | Sorghum | cytosol | 37.7 | 36.61 |
KXG31863 | Sorghum | plastid | 28.97 | 33.69 |
EES02467 | Sorghum | cytosol, peroxisome, plastid | 34.48 | 33.56 |
OQU86302 | Sorghum | mitochondrion | 18.16 | 32.24 |
OQU91195 | Sorghum | cytosol | 27.82 | 26.42 |
OQU83825 | Sorghum | peroxisome, plastid | 25.98 | 25.51 |
OQU89853 | Sorghum | cytosol | 25.52 | 25.06 |
EES09214 | Sorghum | cytosol, peroxisome, plastid | 24.37 | 23.4 |
EES10710 | Sorghum | cytosol | 24.14 | 22.93 |
EER88164 | Sorghum | cytosol | 16.32 | 20.46 |
Protein Annotations
Gene3D:3.30.559.10 | MapMan:50.2.3 | EntrezGene:8065424 | UniProt:C5Z5T7 | InterPro:CAT-like_dom_sf | EnsemblPlants:EER87979 |
ProteinID:EER87979 | ProteinID:EER87979.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004674 |
GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 |
GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR023213 | ProteinID:KXG19490.2 | PFAM:PF02458 | PANTHER:PTHR31642 |
PANTHER:PTHR31642:SF56 | EnsemblPlantsGene:SORBI_3010G066601 | SUPFAM:SSF52777 | unigene:Sbi.6189 | InterPro:Transferase | UniParc:UPI0001A89192 |
RefSeq:XP_002436612.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:5323773..5326218
Molecular Weight (calculated)
46440.8 Da
IEP (calculated)
6.421
GRAVY (calculated)
0.132
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMVELLSTE LVVPAEETPA GAVWLSNLDL AARRGYTPTV YFYRTNNKPE FFEADAVKDS LARALVAFYP LAGRLGLDAA TGRVQIDCTG EGAVFVTARS
101: EYALDELLNE FVPCDEMRHL LVPATPAPNP PCPLLFAQVT RLRCGGVVLG LALHHSVVDA RSAAHFVETW ASIARGGGGG GGDAPLPPCF DHRLLSARPP
201: ATRAVLYDHP EYKPEPAPEH AVAAGSAYAS AIITLSKSQV SALKARCAGA STFRAVVALV WQCACRARSL PADAETRLFS MVDMRARLAP PLPPGYFGNA
301: VIRTSALATV GEVVGNPVGY AARRALAATS QGDDYARSLV DYLEGVDAMN LPRSGISRAH LRAISWMGMS LHDSDFGWGA PVFMGPALMY YSGFVYVMQA
401: PGKEGAVALA LSLEPESMPE FRKVFADEVA RLQTI
101: EYALDELLNE FVPCDEMRHL LVPATPAPNP PCPLLFAQVT RLRCGGVVLG LALHHSVVDA RSAAHFVETW ASIARGGGGG GGDAPLPPCF DHRLLSARPP
201: ATRAVLYDHP EYKPEPAPEH AVAAGSAYAS AIITLSKSQV SALKARCAGA STFRAVVALV WQCACRARSL PADAETRLFS MVDMRARLAP PLPPGYFGNA
301: VIRTSALATV GEVVGNPVGY AARRALAATS QGDDYARSLV DYLEGVDAMN LPRSGISRAH LRAISWMGMS LHDSDFGWGA PVFMGPALMY YSGFVYVMQA
401: PGKEGAVALA LSLEPESMPE FRKVFADEVA RLQTI
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.