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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG19490 Sorghum cytosol 100.0 100.0
Zm00001d045092_P001 Maize cytosol 91.72 90.68
EER89344 Sorghum cytosol 77.47 77.12
EER98918 Sorghum cytosol, peroxisome, plastid 52.87 50.77
EES07672 Sorghum cytosol 43.68 42.13
EER98920 Sorghum cytosol 41.61 41.8
KXG31953 Sorghum cytosol, endoplasmic reticulum, peroxisome 40.69 40.78
EES15064 Sorghum cytosol 40.23 39.5
EER96600 Sorghum peroxisome 38.85 38.85
EES15065 Sorghum cytosol, peroxisome, plastid 38.85 37.89
EES02456 Sorghum cytosol, peroxisome, plastid 39.08 37.53
OQU75613 Sorghum cytosol, peroxisome, plastid 37.47 37.39
KXG31860 Sorghum cytosol, peroxisome, plastid 37.47 37.39
KXG31859 Sorghum peroxisome 37.47 37.3
KXG31858 Sorghum peroxisome 37.01 37.27
KXG31952 Sorghum cytosol 35.4 37.11
KXG31861 Sorghum cytosol, peroxisome, plastid 37.47 37.05
EES11073 Sorghum mitochondrion 37.24 36.73
EES05411 Sorghum cytosol 37.7 36.61
KXG31863 Sorghum plastid 28.97 33.69
EES02467 Sorghum cytosol, peroxisome, plastid 34.48 33.56
OQU86302 Sorghum mitochondrion 18.16 32.24
OQU91195 Sorghum cytosol 27.82 26.42
OQU83825 Sorghum peroxisome, plastid 25.98 25.51
OQU89853 Sorghum cytosol 25.52 25.06
EES09214 Sorghum cytosol, peroxisome, plastid 24.37 23.4
EES10710 Sorghum cytosol 24.14 22.93
EER88164 Sorghum cytosol 16.32 20.46
Protein Annotations
Gene3D:3.30.559.10MapMan:50.2.3EntrezGene:8065424UniProt:C5Z5T7InterPro:CAT-like_dom_sfEnsemblPlants:EER87979
ProteinID:EER87979ProteinID:EER87979.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004674
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016740GO:GO:0016747InterPro:IPR023213ProteinID:KXG19490.2PFAM:PF02458PANTHER:PTHR31642
PANTHER:PTHR31642:SF56EnsemblPlantsGene:SORBI_3010G066601SUPFAM:SSF52777unigene:Sbi.6189InterPro:TransferaseUniParc:UPI0001A89192
RefSeq:XP_002436612.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:5323773..5326218
Molecular Weight (calculated)
46440.8 Da
IEP (calculated)
6.421
GRAVY (calculated)
0.132
Length
435 amino acids
Sequence
(BLAST)
001: MAMVELLSTE LVVPAEETPA GAVWLSNLDL AARRGYTPTV YFYRTNNKPE FFEADAVKDS LARALVAFYP LAGRLGLDAA TGRVQIDCTG EGAVFVTARS
101: EYALDELLNE FVPCDEMRHL LVPATPAPNP PCPLLFAQVT RLRCGGVVLG LALHHSVVDA RSAAHFVETW ASIARGGGGG GGDAPLPPCF DHRLLSARPP
201: ATRAVLYDHP EYKPEPAPEH AVAAGSAYAS AIITLSKSQV SALKARCAGA STFRAVVALV WQCACRARSL PADAETRLFS MVDMRARLAP PLPPGYFGNA
301: VIRTSALATV GEVVGNPVGY AARRALAATS QGDDYARSLV DYLEGVDAMN LPRSGISRAH LRAISWMGMS LHDSDFGWGA PVFMGPALMY YSGFVYVMQA
401: PGKEGAVALA LSLEPESMPE FRKVFADEVA RLQTI
Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.