Factsheet for Zm00001d045092_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19490	Sorghum	cytosol	90.68	91.72
EER87979	Sorghum	cytosol	90.68	91.72
Zm00001d037073_P001	Maize	cytosol	77.5	77.85
Zm00001d045091_P001	Maize	cytosol	75.68	76.91
Zm00001d020528_P001	Maize	cytosol	52.5	52.03
Zm00001d018367_P001	Maize	cytosol	43.64	43.44
Zm00001d032148_P001	Maize	cytosol	40.68	41.53
Zm00001d020530_P001	Maize	cytosol, extracellular	40.91	41.47
Zm00001d003129_P001	Maize	mitochondrion	13.41	40.14
Zm00001d039956_P001	Maize	peroxisome	38.86	39.4
Zm00001d039952_P002	Maize	peroxisome	38.18	38.62
Zm00001d039837_P002	Maize	peroxisome	37.27	38.41
Zm00001d017186_P001	Maize	extracellular	37.95	37.44
Zm00001d039840_P001	Maize	peroxisome	36.82	37.07
Zm00001d039833_P001	Maize	cytosol	37.5	36.91
Zm00001d039947_P002	Maize	plasma membrane	38.64	36.48
Zm00001d005607_P001	Maize	cytosol	36.36	36.45
Zm00001d050455_P001	Maize	plastid	39.09	36.36
Zm00001d041341_P001	Maize	cytosol	30.45	33.42
Zm00001d039951_P001	Maize	nucleus	22.73	32.57
Zm00001d007606_P001	Maize	peroxisome	29.09	27.41
Zm00001d033521_P001	Maize	cytosol	27.95	27.09
Zm00001d027946_P001	Maize	cytosol	26.59	26.41
Zm00001d048870_P001	Maize	peroxisome	27.27	26.37
Zm00001d048872_P001	Maize	cytosol	27.5	26.19
Zm00001d030542_P001	Maize	plastid	25.68	25.62
Zm00001d006263_P001	Maize	cytosol	25.68	25.39
Zm00001d027948_P001	Maize	cytosol	25.23	25.06
Zm00001d021329_P001	Maize	cytosol	25.45	24.94
Zm00001d006260_P001	Maize	cytosol	22.95	24.88
Zm00001d048871_P001	Maize	peroxisome	26.14	24.78
Zm00001d021324_P001	Maize	cytosol	24.77	24.55
Zm00001d052449_P001	Maize	cytosol, peroxisome, plastid	24.77	23.9
Zm00001d022592_P001	Maize	cytosol	23.18	22.92
Zm00001d003856_P001	Maize	cytosol	22.73	22.32
Zm00001d030540_P001	Maize	plastid	11.36	18.32

Protein Annotations

EnsemblPlants:Zm00001d045092_P001	EnsemblPlants:Zm00001d045092_T001	EnsemblPlantsGene:Zm00001d045092	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642
PANTHER:PTHR31642:SF56	PFAM:PF02458	ProteinID:AQL01528.1	SEG:seg	SUPFAM:SSF52777	UniParc:UPI0008447331
UniProt:A0A1D6NTK0	MapMan:50.2.3	:	:	:	:

Description

Spermidine hydroxycinnamoyl transferase

Coordinates

chr9:-:12257338..12258660

Molecular Weight (calculated)

46388.7 Da

IEP (calculated)

6.621

GRAVY (calculated)

0.163

Length

440 amino acids

Sequence
(BLAST)

001: MAMVELLSTE LVVPAEETPA GAVWLSNLDL AARRGYTPTV YFYRTNGKPE FFETDAVKDS LARALVSFYP LAGRLGLDAA TGRVQIDCTG EGAVFVTARW
101: EQYALDELVG EFVPCDEMRA LLVPPTPAPN PPCPLLFAQV TRLRCGGVVL GLALHHSVVD ARSAAHFVET WASIARGGAG AGAGNPLPPC FDHRLLSARP
201: PGARAVAYDH PEYKAEAPAA ADGGAGGGAA AGYASAIVTL SKAQVAALKA RCAGASTFRA VVALVWQCAC RARALPADAE TRLFSMVDMR ARLAPPLPPG
301: YFGNAVVRTS ALATAGEVTG NPVGYAARRA LAATSPGDDY ARSLVDYLEG VDAMNLPRSG ISRAHLRAIS WMGMSLHDSD FGWGAPVFMG PALMYYSGFV
401: YVMQAPGKEG AVALALSLEP ESMPEFRKVF AQELARLQAI

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.