Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0037g00580.t01 | Wine grape | mitochondrion | 87.64 | 85.34 |
| VIT_11s0103g00200.t01 | Wine grape | cytosol | 55.06 | 53.73 |
| VIT_09s0018g01190.t01 | Wine grape | cytosol | 40.45 | 41.96 |
| VIT_11s0037g00440.t01 | Wine grape | cytosol | 36.4 | 37.41 |
| TraesCS6B01G030200.1 | Wheat | cytosol | 8.09 | 27.27 |
| TraesCS2D01G490400.1 | Wheat | cytosol | 26.97 | 27.21 |
| TraesCS6D01G359800.1 | Wheat | peroxisome | 26.74 | 27.05 |
| HORVU2Hr1G109590.1 | Barley | cytosol | 19.55 | 26.93 |
| HORVU2Hr1G109430.2 | Barley | cytosol | 26.29 | 26.71 |
| HORVU4Hr1G077720.7 | Barley | cytosol, extracellular, peroxisome | 25.84 | 26.68 |
| TraesCS2A01G490000.1 | Wheat | cytosol | 26.29 | 26.53 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 22.02 | 26.06 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 22.47 | 25.91 |
| TraesCS5A01G549100.1 | Wheat | cytosol | 15.06 | 25.87 |
| Os04t0664600-00 | Rice | cytosol | 26.07 | 25.84 |
| Zm00001d021329_P001 | Maize | cytosol | 26.07 | 25.84 |
| TraesCS4D01G024500.1 | Wheat | cytosol | 25.84 | 25.73 |
| TraesCS2D01G490900.1 | Wheat | cytosol | 25.39 | 25.62 |
| TraesCS2D01G491100.1 | Wheat | cytosol | 25.39 | 25.62 |
| TraesCS6A01G375300.1 | Wheat | mitochondrion | 26.07 | 25.61 |
| TraesCS4A01G003300.1 | Wheat | cytosol, extracellular, peroxisome | 24.72 | 25.52 |
| OQU89853 | Sorghum | cytosol | 25.39 | 25.51 |
| TraesCS4D01G300400.1 | Wheat | cytosol, extracellular, peroxisome | 24.49 | 25.29 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 25.17 | 25.23 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 19.55 | 25.22 |
| GSMUA_Achr4P00280_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 20.45 | 25.21 |
| Zm00001d006263_P001 | Maize | cytosol | 25.17 | 25.17 |
| TraesCS5A01G337500.1 | Wheat | cytosol | 24.49 | 25.12 |
| TraesCS5D01G342100.1 | Wheat | cytosol | 24.49 | 25.12 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 19.78 | 25.0 |
| TraesCS4A01G287700.1 | Wheat | mitochondrion | 8.76 | 25.0 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 8.76 | 25.0 |
| TraesCS5A01G338600.1 | Wheat | cytosol | 24.72 | 24.94 |
| HORVU5Hr1G084810.1 | Barley | cytosol | 24.04 | 24.94 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 22.92 | 24.94 |
| Os10t0380100-01 | Rice | mitochondrion | 16.85 | 24.92 |
| TraesCS7A01G023200.1 | Wheat | plastid | 15.96 | 24.91 |
| OQU91195 | Sorghum | cytosol | 25.62 | 24.89 |
| Zm00001d033521_P001 | Maize | cytosol | 25.39 | 24.89 |
| Os10t0379100-01 | Rice | cytosol | 24.27 | 24.77 |
| TraesCSU01G244500.1 | Wheat | cytosol | 10.11 | 24.73 |
| TraesCS5D01G342700.1 | Wheat | cytosol | 24.49 | 24.72 |
| HORVU5Hr1G084820.2 | Barley | cytosol | 24.04 | 24.65 |
| TraesCS5D01G342400.1 | Wheat | cytosol, golgi, plastid | 24.04 | 24.65 |
| Zm00001d003856_P001 | Maize | cytosol | 24.72 | 24.55 |
| TraesCS4D01G300800.1 | Wheat | cytosol, extracellular, peroxisome | 24.27 | 24.55 |
| HORVU5Hr1G077720.1 | Barley | mitochondrion | 24.04 | 24.54 |
| HORVU5Hr1G079580.1 | Barley | mitochondrion | 24.04 | 24.54 |
| TraesCS5A01G304000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 23.82 | 24.48 |
| TraesCS5A01G337800.1 | Wheat | cytosol | 23.82 | 24.42 |
| TraesCS5D01G342300.1 | Wheat | cytosol | 23.82 | 24.42 |
| TraesCS5A01G338700.1 | Wheat | cytosol | 24.04 | 24.37 |
| TraesCS5D01G342800.1 | Wheat | cytosol | 24.04 | 24.37 |
| TraesCS5D01G310800.1 | Wheat | cytosol | 23.82 | 24.31 |
| Os09t0543900-01 | Rice | cytosol | 23.82 | 24.26 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 18.88 | 24.21 |
| Zm00001d007606_P001 | Maize | peroxisome | 25.39 | 24.2 |
| TraesCS5A01G337900.1 | Wheat | cytosol | 23.6 | 24.19 |
| Zm00001d006260_P001 | Maize | cytosol | 22.02 | 24.14 |
| Os09t0544000-01 | Rice | cytosol | 24.49 | 24.11 |
| TraesCS4A01G285200.1 | Wheat | cytosol | 25.17 | 24.09 |
| TraesCS4A01G003400.1 | Wheat | cytosol | 22.92 | 24.06 |
| TraesCS5A01G337700.1 | Wheat | cytosol | 23.37 | 23.96 |
| TraesCS2D01G568200.1 | Wheat | mitochondrion | 23.15 | 23.95 |
| HORVU5Hr1G084980.1 | Barley | cytosol | 24.94 | 23.92 |
| TraesCS4D01G359800.1 | Wheat | cytosol | 23.15 | 23.9 |
| Zm00001d021324_P001 | Maize | cytosol | 23.82 | 23.87 |
| TraesCS4A01G287500.1 | Wheat | cytosol | 24.94 | 23.87 |
| EES10710 | Sorghum | cytosol | 24.49 | 23.8 |
| HORVU6Hr1G088480.1 | Barley | extracellular, plasma membrane | 25.17 | 23.78 |
| Zm00001d048870_P001 | Maize | peroxisome | 24.27 | 23.74 |
| Zm00001d027946_P001 | Maize | cytosol | 23.6 | 23.7 |
| HORVU6Hr1G088530.1 | Barley | cytosol | 8.76 | 23.64 |
| Zm00001d048872_P001 | Maize | cytosol | 24.27 | 23.38 |
| Zm00001d030542_P001 | Maize | plastid | 23.15 | 23.36 |
| OQU83825 | Sorghum | peroxisome, plastid | 23.15 | 23.25 |
| Os04t0664500-01 | Rice | cytosol | 6.52 | 23.2 |
| Zm00001d027948_P001 | Maize | cytosol | 22.92 | 23.02 |
| Os11t0643100-01 | Rice | peroxisome | 23.15 | 22.99 |
| TraesCS2A01G490700.1 | Wheat | plastid | 25.84 | 22.95 |
| GSMUA_Achr11P... | Banana | cytosol | 21.35 | 22.89 |
| TraesCS5A01G137500.1 | Wheat | plastid | 23.15 | 22.89 |
| TraesCS4A01G002900.1 | Wheat | cytosol, extracellular, peroxisome | 15.73 | 22.88 |
| Os03t0185700-01 | Rice | cytosol, peroxisome, plasma membrane | 23.37 | 22.81 |
| HORVU2Hr1G109470.1 | Barley | cytosol | 10.11 | 22.73 |
| TraesCS2D01G582000.1 | Wheat | cytosol | 22.47 | 22.73 |
| HORVU2Hr1G125370.1 | Barley | cytosol | 21.8 | 22.72 |
| HORVU2Hr1G125270.1 | Barley | peroxisome | 22.25 | 22.5 |
| Os12t0134700-01 | Rice | cytosol | 22.47 | 22.42 |
| HORVU6Hr1G073010.3 | Barley | cytosol | 22.25 | 22.4 |
| TraesCS3D01G545300.1 | Wheat | cytosol | 22.7 | 22.39 |
| TraesCS4A01G003100.1 | Wheat | peroxisome | 22.7 | 22.39 |
| TraesCS1A01G088300.1 | Wheat | cytosol | 22.02 | 22.37 |
| TraesCS2A01G570600.1 | Wheat | cytosol | 22.02 | 22.32 |
| TraesCS2D01G016600.1 | Wheat | cytosol | 23.37 | 22.27 |
| Os11t0642400-01 | Rice | peroxisome | 22.25 | 22.25 |
| Zm00001d022592_P001 | Maize | cytosol | 22.25 | 22.25 |
| TraesCS5D01G154500.1 | Wheat | plastid | 22.47 | 22.22 |
| TraesCS4D01G300500.1 | Wheat | peroxisome | 22.47 | 22.17 |
| HORVU5Hr1G044390.1 | Barley | cytosol, peroxisome, plastid | 22.25 | 22.15 |
| TraesCS2D01G581500.1 | Wheat | cytosol | 21.8 | 22.1 |
| HORVU4Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 22.02 | 21.92 |
| TraesCS1A01G088400.1 | Wheat | cytosol | 21.57 | 21.92 |
| TraesCS1D01G089900.1 | Wheat | cytosol | 21.57 | 21.92 |
| TraesCS6D01G273300.1 | Wheat | cytosol | 21.8 | 21.9 |
| HORVU4Hr1G077780.1 | Barley | peroxisome | 22.25 | 21.71 |
| TraesCS6A01G292100.1 | Wheat | cytosol | 21.57 | 21.67 |
| EER88164 | Sorghum | cytosol | 16.85 | 21.61 |
| TraesCSU01G038200.1 | Wheat | peroxisome | 21.8 | 21.6 |
| HORVU3Hr1G027720.1 | Barley | cytosol | 6.07 | 21.6 |
| Zm00001d048871_P001 | Maize | peroxisome | 22.47 | 21.55 |
| Zm00001d052449_P001 | Maize | cytosol, peroxisome, plastid | 22.02 | 21.49 |
| TraesCS1D01G089600.1 | Wheat | cytosol | 21.12 | 21.46 |
| EES09214 | Sorghum | cytosol, peroxisome, plastid | 21.8 | 21.41 |
| HORVU1Hr1G019380.2 | Barley | cytosol, mitochondrion, plasma membrane | 22.25 | 21.34 |
| TraesCS7A01G148300.1 | Wheat | peroxisome | 20.45 | 20.45 |
| HORVU7Hr1G030410.3 | Barley | peroxisome | 20.9 | 20.13 |
| Os05t0116800-00 | Rice | cytosol, plastid, vacuole | 15.96 | 17.49 |
| HORVU2Hr1G002500.2 | Barley | cytosol | 22.02 | 17.47 |
| Zm00001d030540_P001 | Maize | plastid | 10.56 | 17.22 |
| HORVU2Hr1G124070.1 | Barley | cytosol | 7.42 | 11.0 |
Protein Annotations
| EntrezGene:100258760 | wikigene:100258760 | Gene3D:3.30.559.10 | MapMan:8.4.2 | InterPro:CAT-like_dom_sf | ProteinID:CCB59773 |
| ProteinID:CCB59773.1 | UniProt:F6HYK9 | EMBL:FN596499 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR023213 | EntrezGene:LOC100258760 | wikigene:LOC100258760 | PFAM:PF02458 | PANTHER:PTHR31642 |
| PANTHER:PTHR31642:SF57 | TIGR:TC57139 | TIGR:TC60626 | TIGR:TC68427 | TIGR:TC70185 | InterPro:Transferase |
| UniParc:UPI0001984460 | ArrayExpress:VIT_11s0037g00570 | EnsemblPlantsGene:VIT_11s0037g00570 | EnsemblPlants:VIT_11s0037g00570.t01 | unigene:Vvi.9526 | RefSeq:XP_002276550 |
| RefSeq:XP_002276550.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:8428183..8429807
Molecular Weight (calculated)
49400.9 Da
IEP (calculated)
6.790
GRAVY (calculated)
-0.273
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKVVATYTV RPARETPGGC RCVSDSDQVR ALTHAPTFYF YPPVNVSLES ATEILRHSLS EALVIFYPLA GRLHWIGGGR LELDCNALGA LLIAVESEGK
101: IDDYGDFRPT PEIRALIPSV DYDKPIDELP LLLVQLTKFS CGSMSLGLGI SHTIADGLSA LHFISEWAKI ARGEQANSPP FLDRSVLLAP EHLTAPVFDH
201: PEFGPQPLLI GKQDNMEERK RETTTLMLKL SKDQVEKLKD KANKDRSPSD NKRPYTRYEA IAGHIWRSAC KARQHESQQP TLLSIIVDAR NRMEPPLPPR
301: YFGNGTFRVT AETTSGELVS NSLGFASGKA RQAIEKATHE YLQSSLVYVK CQEDVTNFRN FHTVGCAKGA FYGNPNLEIT SWARLPIYGA DFGWGQEIYM
401: GPGGIGYDGK VFVFPGQGQD GSFVVALRLQ VRHVDAFQKF FYEDI
101: IDDYGDFRPT PEIRALIPSV DYDKPIDELP LLLVQLTKFS CGSMSLGLGI SHTIADGLSA LHFISEWAKI ARGEQANSPP FLDRSVLLAP EHLTAPVFDH
201: PEFGPQPLLI GKQDNMEERK RETTTLMLKL SKDQVEKLKD KANKDRSPSD NKRPYTRYEA IAGHIWRSAC KARQHESQQP TLLSIIVDAR NRMEPPLPPR
301: YFGNGTFRVT AETTSGELVS NSLGFASGKA RQAIEKATHE YLQSSLVYVK CQEDVTNFRN FHTVGCAKGA FYGNPNLEIT SWARLPIYGA DFGWGQEIYM
401: GPGGIGYDGK VFVFPGQGQD GSFVVALRLQ VRHVDAFQKF FYEDI
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.