Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G518300.1 | Wheat | cytosol | 94.29 | 93.65 |
| TraesCS2D01G490400.1 | Wheat | cytosol | 93.84 | 93.2 |
| TraesCS2A01G490000.1 | Wheat | cytosol | 93.61 | 92.97 |
| HORVU2Hr1G109590.1 | Barley | cytosol | 59.36 | 80.5 |
| HORVU3Hr1G027720.1 | Barley | cytosol | 22.6 | 79.2 |
| Os04t0664500-01 | Rice | cytosol | 22.37 | 78.4 |
| Os04t0664600-00 | Rice | cytosol | 77.85 | 75.95 |
| HORVU2Hr1G109470.1 | Barley | cytosol | 32.42 | 71.72 |
| HORVU6Hr1G088480.1 | Barley | extracellular, plasma membrane | 65.98 | 61.36 |
| HORVU6Hr1G088530.1 | Barley | cytosol | 22.83 | 60.61 |
| Solyc11g066640.1.1 | Tomato | cytosol | 53.42 | 53.3 |
| GSMUA_Achr8P03170_001 | Banana | cytosol | 45.43 | 52.93 |
| PGSC0003DMT400001145 | Potato | cytosol | 53.2 | 52.83 |
| PGSC0003DMT400018441 | Potato | cytosol | 52.74 | 51.91 |
| GSMUA_Achr8P15170_001 | Banana | cytosol | 45.66 | 51.81 |
| Solyc06g074710.1.1 | Tomato | cytosol | 52.28 | 51.58 |
| GSMUA_Achr8P03210_001 | Banana | cytosol | 40.64 | 50.57 |
| GSMUA_Achr8P03200_001 | Banana | cytosol | 39.73 | 50.43 |
| GSMUA_Achr8P03190_001 | Banana | cytosol | 39.27 | 49.57 |
| GSMUA_Achr8P03180_001 | Banana | plastid | 45.66 | 48.9 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 49.54 | 48.87 |
| HORVU5Hr1G084820.2 | Barley | cytosol | 48.17 | 48.62 |
| Solyc11g071470.1.1 | Tomato | cytosol | 48.63 | 48.08 |
| HORVU5Hr1G079580.1 | Barley | mitochondrion | 47.72 | 47.94 |
| HORVU5Hr1G077720.1 | Barley | mitochondrion | 47.72 | 47.94 |
| Solyc11g071480.1.1 | Tomato | cytoskeleton, cytosol, peroxisome | 48.4 | 47.86 |
| HORVU5Hr1G084810.1 | Barley | cytosol | 45.89 | 46.85 |
| HORVU5Hr1G084980.1 | Barley | cytosol | 48.4 | 45.69 |
| PGSC0003DMT400048126 | Potato | cytosol | 42.92 | 41.69 |
| PGSC0003DMT400048130 | Potato | cytoskeleton, cytosol, peroxisome | 48.86 | 37.61 |
| HORVU4Hr1G077720.7 | Barley | cytosol, extracellular, peroxisome | 35.62 | 36.19 |
| HORVU2Hr1G125370.1 | Barley | cytosol | 34.02 | 34.89 |
| HORVU2Hr1G125270.1 | Barley | peroxisome | 34.93 | 34.77 |
| HORVU2Hr1G002500.2 | Barley | cytosol | 42.47 | 33.16 |
| HORVU1Hr1G019380.2 | Barley | cytosol, mitochondrion, plasma membrane | 34.93 | 32.97 |
| HORVU7Hr1G030410.3 | Barley | peroxisome | 34.47 | 32.68 |
| HORVU2Hr1G124070.1 | Barley | cytosol | 22.37 | 32.67 |
| HORVU5Hr1G044390.1 | Barley | cytosol, peroxisome, plastid | 33.1 | 32.44 |
| HORVU4Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 33.1 | 32.44 |
| HORVU6Hr1G073010.3 | Barley | cytosol | 32.65 | 32.35 |
| HORVU4Hr1G077780.1 | Barley | peroxisome | 33.33 | 32.02 |
| HORVU1Hr1G081430.3 | Barley | cytosol, peroxisome, plastid | 27.63 | 31.76 |
| HORVU7Hr1G030780.1 | Barley | cytosol | 29.0 | 29.53 |
| HORVU6Hr1G056230.2 | Barley | cytosol | 29.68 | 29.48 |
| KRH02826 | Soybean | cytosol | 30.14 | 29.01 |
| HORVU7Hr1G030670.1 | Barley | mitochondrion | 30.37 | 28.85 |
| HORVU5Hr1G064280.1 | Barley | plastid | 28.54 | 28.54 |
| Bra024450.1-P | Field mustard | cytosol | 24.66 | 28.42 |
| CDY56515 | Canola | cytosol | 24.66 | 28.42 |
| CDY62143 | Canola | cytosol | 24.66 | 28.42 |
| VIT_11s0103g00200.t01 | Wine grape | cytosol | 29.22 | 28.07 |
| KRH53324 | Soybean | cytosol | 14.84 | 26.86 |
| KRH02825 | Soybean | cytosol | 27.85 | 26.52 |
| HORVU7Hr1G118090.1 | Barley | cytosol | 26.48 | 26.48 |
| VIT_11s0037g00570.t01 | Wine grape | mitochondrion | 26.71 | 26.29 |
| AT2G19070.1 | Thale cress | cytosol | 26.94 | 26.16 |
| KRH46099 | Soybean | cytosol, plastid | 26.94 | 26.11 |
| HORVU5Hr1G108900.1 | Barley | peroxisome | 26.71 | 26.06 |
| CDY66506 | Canola | cytosol | 26.26 | 26.02 |
| Bra038561.1-P | Field mustard | cytosol | 26.26 | 25.5 |
| KRG89744 | Soybean | cytosol | 26.94 | 25.43 |
| VIT_11s0037g00580.t01 | Wine grape | mitochondrion | 26.48 | 25.38 |
| KRH06686 | Soybean | peroxisome | 26.94 | 25.38 |
| KRG98872 | Soybean | cytosol, peroxisome, plastid | 26.94 | 25.32 |
| CDY03367 | Canola | cytosol | 26.03 | 25.28 |
| KRH32575 | Soybean | cytosol | 25.8 | 25.22 |
| HORVU7Hr1G030740.3 | Barley | cytosol | 24.89 | 25.17 |
| KRH32581 | Soybean | cytosol | 24.66 | 25.12 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 25.11 | 25.11 |
| HORVU3Hr1G097120.2 | Barley | cytosol, plasma membrane | 25.34 | 25.0 |
| HORVU6Hr1G081260.1 | Barley | peroxisome | 26.94 | 24.84 |
| KRH46097 | Soybean | cytosol | 12.79 | 24.78 |
| KRH08423 | Soybean | cytosol | 24.89 | 24.38 |
| KRG98873 | Soybean | mitochondrion | 25.57 | 24.24 |
| KRG98866 | Soybean | cytosol | 24.89 | 24.22 |
| KRG98867 | Soybean | endoplasmic reticulum | 24.89 | 24.06 |
| KRH06685 | Soybean | plastid | 25.11 | 23.97 |
| KRG98999 | Soybean | mitochondrion, peroxisome, plastid | 26.26 | 23.96 |
| KRH70082 | Soybean | cytosol | 14.61 | 23.7 |
| KRH46095 | Soybean | plastid | 25.57 | 23.53 |
| KRH46098 | Soybean | cytosol | 24.43 | 23.46 |
| KRH46094 | Soybean | plastid | 24.66 | 23.23 |
| KRH13469 | Soybean | cytosol | 24.2 | 23.09 |
| KRG98868 | Soybean | cytosol | 22.6 | 22.81 |
| HORVU6Hr1G066420.1 | Barley | cytosol, peroxisome, plastid | 23.52 | 22.79 |
| HORVU2Hr1G086380.1 | Barley | cytosol, nucleus, plastid | 30.14 | 22.68 |
| HORVU0Hr1G023570.1 | Barley | cytosol, peroxisome, plastid | 23.52 | 22.64 |
| KRH30198 | Soybean | cytosol | 24.66 | 22.45 |
| KRH30196 | Soybean | cytosol | 24.66 | 22.45 |
| HORVU2Hr1G112120.3 | Barley | mitochondrion | 12.56 | 22.18 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G109430.2 | EnsemblPlantsGene:HORVU2Hr1G109430 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | GO:GO:0050734 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 |
| PANTHER:PTHR31642:SF44 | PFAM:PF02458 | SEG:seg | UniParc:UPI000B4777C3 | UniProt:A0A287JEC3 | MapMan:50.2.3 |
Description
No Description!
Coordinates
chrchr2H:+:716583338..716584892
Molecular Weight (calculated)
47612.7 Da
IEP (calculated)
4.961
GRAVY (calculated)
0.014
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MKITVLSSRA VKPDYGACGA HPGSTDDVVP LTVLDKANFD AYISVIYAFR PPAPPNAVLE AGLARALVDY REWAGRLGVD AASGDRAILL CDAGARFVEA
101: TADVALDSVM PMKPTPEVLS LHPSGDDGPD ELMLIQVTRF ACGSLVVGFT AQHLVSDGRA TSNFFLAWSQ ATRGVAVDPV PVHDRASFFK PRDPPQVEYE
201: HRGVEFKLPC KEADENDYGD GDVVVVNKVH LSLEFISKLK AQASAGAHRP YSTLRCLVAH LWRCVTKARG LDGSVSTSVA IAVDGRARMS PQVPDGYTGN
301: VVLWARPTAT AQELVTRPLQ HAVELINREV ARINGSYFES FIDFASSEAV RKERLVPAAD AAEMVLSPNI EVDSWLRIPF YDLDFGGGQP FFFMPSYLPV
401: EGLLILLPSF AGDGRVDAYV PLFSRDMDAF KNCCYNLD
101: TADVALDSVM PMKPTPEVLS LHPSGDDGPD ELMLIQVTRF ACGSLVVGFT AQHLVSDGRA TSNFFLAWSQ ATRGVAVDPV PVHDRASFFK PRDPPQVEYE
201: HRGVEFKLPC KEADENDYGD GDVVVVNKVH LSLEFISKLK AQASAGAHRP YSTLRCLVAH LWRCVTKARG LDGSVSTSVA IAVDGRARMS PQVPDGYTGN
301: VVLWARPTAT AQELVTRPLQ HAVELINREV ARINGSYFES FIDFASSEAV RKERLVPAAD AAEMVLSPNI EVDSWLRIPF YDLDFGGGQP FFFMPSYLPV
401: EGLLILLPSF AGDGRVDAYV PLFSRDMDAF KNCCYNLD
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.