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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G524200.1 Wheat cytosol 93.84 94.27
TraesCS7A01G537300.1 Wheat cytosol 92.47 93.1
TraesCS7B01G455100.1 Wheat cytosol 91.55 92.82
Zm00001d032148_P001 Maize cytosol 80.14 81.44
EES15064 Sorghum cytosol 81.51 80.59
EES15065 Sorghum cytosol, peroxisome, plastid 69.18 67.94
Zm00001d050455_P001 Maize plastid 68.49 63.42
Zm00001d041341_P001 Maize cytosol 46.8 51.12
HORVU5Hr1G064280.1 Barley plastid 45.43 45.43
HORVU7Hr1G030670.1 Barley mitochondrion 46.8 44.47
HORVU5Hr1G108900.1 Barley peroxisome 44.75 43.65
HORVU3Hr1G097120.2 Barley cytosol, plasma membrane 42.69 42.12
HORVU7Hr1G030780.1 Barley cytosol 41.32 42.09
HORVU6Hr1G081260.1 Barley peroxisome 44.75 41.26
HORVU6Hr1G066420.1 Barley cytosol, peroxisome, plastid 41.55 40.27
HORVU7Hr1G030740.3 Barley cytosol 39.73 40.18
HORVU0Hr1G023570.1 Barley cytosol, peroxisome, plastid 41.55 40.0
HORVU6Hr1G012740.1 Barley peroxisome 39.95 39.95
HORVU6Hr1G056230.2 Barley cytosol 38.36 38.1
HORVU2Hr1G112120.3 Barley mitochondrion 20.32 35.89
HORVU1Hr1G081430.3 Barley cytosol, peroxisome, plastid 30.37 34.91
HORVU6Hr1G088530.1 Barley cytosol 11.87 31.52
HORVU4Hr1G077720.7 Barley cytosol, extracellular, peroxisome 29.0 29.47
HORVU2Hr1G125370.1 Barley cytosol 28.31 29.04
HORVU4Hr1G004050.1 Barley cytosol 29.22 28.83
HORVU2Hr1G086380.1 Barley cytosol, nucleus, plastid 37.9 28.52
HORVU2Hr1G125270.1 Barley peroxisome 28.54 28.41
HORVU5Hr1G084820.2 Barley cytosol 26.71 26.96
HORVU5Hr1G084810.1 Barley cytosol 26.26 26.81
HORVU7Hr1G030410.3 Barley peroxisome 28.08 26.62
HORVU4Hr1G077790.1 Barley endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 27.17 26.62
HORVU2Hr1G109430.2 Barley cytosol 26.48 26.48
HORVU4Hr1G077780.1 Barley peroxisome 27.4 26.32
HORVU2Hr1G109470.1 Barley cytosol 11.87 26.26
HORVU5Hr1G079580.1 Barley mitochondrion 26.03 26.15
HORVU5Hr1G077720.1 Barley mitochondrion 26.03 26.15
HORVU6Hr1G073010.3 Barley cytosol 26.26 26.02
HORVU6Hr1G088480.1 Barley extracellular, plasma membrane 27.85 25.9
HORVU5Hr1G084980.1 Barley cytosol 27.4 25.86
HORVU1Hr1G019380.2 Barley cytosol, mitochondrion, plasma membrane 27.4 25.86
HORVU2Hr1G109590.1 Barley cytosol 18.49 25.08
HORVU5Hr1G044390.1 Barley cytosol, peroxisome, plastid 24.66 24.16
HORVU3Hr1G027720.1 Barley cytosol 5.94 20.8
HORVU2Hr1G002500.2 Barley cytosol 24.2 18.89
HORVU2Hr1G124070.1 Barley cytosol 7.53 11.0
Protein Annotations
EMBL:AK362798EnsemblPlants:HORVU7Hr1G118090.1EnsemblPlantsGene:HORVU7Hr1G118090Gene3D:3.30.559.10GO:GO:0003674GO:GO:0003824
GO:GO:0016740GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31642
PANTHER:PTHR31642:SF25PFAM:PF02458SEG:segSUPFAM:SSF52777UniParc:UPI00020067FCUniProt:F2DFY1
MapMan:50.2.3:::::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DFY1]
Coordinates
chrchr7H:+:646600839..646607083
Molecular Weight (calculated)
47834.5 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.039
Length
438 amino acids
Sequence
(BLAST)
001: MMKVEVVESA LVAPSEETPR RELWLSNLDL AVPKTHTPLV YYYPAPAPAT AAPDADPAGF FSPERLRAAL ARALVLFYPL AGRLGREGEG GRLQIDCSGE
101: GALFVVARAP DVAGDELFGS GYEPSPEIRR MFVPFAPSGD PPCLMAMFQV TFLKCGGVVL GTGIHHVTMD GMGAFHFIQT WTGLARGLAL SEACPSPPFH
201: DRTLLRARSP PRPEFDHPVY SPEYLNGAPR PFVTRVYSVS PKLLADLKSR CAPGASTYGA VTAHLWRCMC VARGLAAGSD TRLRVPANIR HRLRPPLPRQ
301: FFGNAIVRDL VTVKVGDVLA QPLGYVADTI RKAVEHVDDA YTRSVMDYLE VESEKGSQAA RGQLMPESDL WVVSWLGMPM YDADFGWGAP RFVAPAQMFG
401: SGTAYVTQRG ADRDDGIAVL FALEPQYLHC FQDVFYGE
Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.