Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G336100.1 | Wheat | cytosol | 78.32 | 88.36 |
| HORVU5Hr1G108900.1 | Barley | peroxisome | 62.95 | 66.59 |
| HORVU3Hr1G097120.2 | Barley | cytosol, plasma membrane | 59.79 | 63.96 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 49.68 | 53.88 |
| HORVU6Hr1G066420.1 | Barley | cytosol, peroxisome, plastid | 47.37 | 49.78 |
| HORVU0Hr1G023570.1 | Barley | cytosol, peroxisome, plastid | 47.37 | 49.45 |
| HORVU2Hr1G112120.3 | Barley | mitochondrion | 23.79 | 45.56 |
| HORVU7Hr1G118090.1 | Barley | cytosol | 41.26 | 44.75 |
| HORVU5Hr1G064280.1 | Barley | plastid | 39.79 | 43.15 |
| HORVU7Hr1G030670.1 | Barley | mitochondrion | 39.79 | 41.0 |
| HORVU7Hr1G030780.1 | Barley | cytosol | 36.21 | 40.0 |
| HORVU7Hr1G030740.3 | Barley | cytosol | 34.74 | 38.11 |
| HORVU6Hr1G056230.2 | Barley | cytosol | 33.26 | 35.83 |
| HORVU1Hr1G081430.3 | Barley | cytosol, peroxisome, plastid | 26.11 | 32.55 |
| HORVU4Hr1G004050.1 | Barley | cytosol | 25.68 | 27.48 |
| HORVU2Hr1G086380.1 | Barley | cytosol, nucleus, plastid | 33.05 | 26.98 |
| HORVU2Hr1G109430.2 | Barley | cytosol | 24.84 | 26.94 |
| HORVU6Hr1G088530.1 | Barley | cytosol | 8.84 | 25.45 |
| HORVU5Hr1G084810.1 | Barley | cytosol | 22.95 | 25.41 |
| HORVU2Hr1G109470.1 | Barley | cytosol | 10.53 | 25.25 |
| HORVU5Hr1G084820.2 | Barley | cytosol | 22.95 | 25.12 |
| HORVU4Hr1G077720.7 | Barley | cytosol, extracellular, peroxisome | 22.32 | 24.59 |
| HORVU5Hr1G079580.1 | Barley | mitochondrion | 22.53 | 24.54 |
| HORVU5Hr1G077720.1 | Barley | mitochondrion | 22.53 | 24.54 |
| HORVU6Hr1G088480.1 | Barley | extracellular, plasma membrane | 24.0 | 24.2 |
| HORVU5Hr1G044390.1 | Barley | cytosol, peroxisome, plastid | 22.74 | 24.16 |
| HORVU2Hr1G109590.1 | Barley | cytosol | 16.21 | 23.84 |
| HORVU5Hr1G084980.1 | Barley | cytosol | 22.74 | 23.28 |
| HORVU2Hr1G125370.1 | Barley | cytosol | 20.63 | 22.95 |
| HORVU6Hr1G073010.3 | Barley | cytosol | 21.26 | 22.85 |
| HORVU4Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 21.47 | 22.82 |
| HORVU4Hr1G077780.1 | Barley | peroxisome | 21.89 | 22.81 |
| HORVU1Hr1G019380.2 | Barley | cytosol, mitochondrion, plasma membrane | 21.89 | 22.41 |
| HORVU2Hr1G125270.1 | Barley | peroxisome | 20.63 | 22.27 |
| HORVU7Hr1G030410.3 | Barley | peroxisome | 21.05 | 21.64 |
| HORVU3Hr1G027720.1 | Barley | cytosol | 5.47 | 20.8 |
| HORVU2Hr1G002500.2 | Barley | cytosol | 20.63 | 17.47 |
| HORVU2Hr1G124070.1 | Barley | cytosol | 6.74 | 10.67 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G081260.1 | EnsemblPlantsGene:HORVU6Hr1G081260 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | SEG:seg | SUPFAM:SSF52777 | UniParc:UPI000B486A53 | UniProt:A0A287UWY3 | MapMan:50.2.3 |
Description
No Description!
Coordinates
chrchr6H:-:545264726..545266910
Molecular Weight (calculated)
51274.0 Da
IEP (calculated)
5.730
GRAVY (calculated)
0.121
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MACVEEAKVV ESCMAEEVNS KVVDCCIMEE VKVVECCIME EVRVVECCMV TPSEETPRHG LWLSPLDLMM VNKGHTPTVY FYRSASDDGF FDVARLKAAM
101: AKALVPFYPL AGRLGVDGDG RPEIDCTRQG ARFVVARSDL AADDFSAREP SPELRRLFVP RDIDDVMLAV QVTFFRCGGV ALGTALHHVA IDALSAFHFF
201: QTWSAFSRDG AGDGAGAGAA TAALELPCHD RTLLRARSPP RVVNPDALSV FLPLKNDPSI PVLEPSGPAV NEIFVLSNDQ VVALKRAYGG ASTFCALSAR
301: VWRCMCAARR LPPDAQTRLT FPANLRHSLR PPLPARYFGN GIILLGAACK VRDVVAAGSG DQAPLASVAG RIRDAVRGLD DELVRSTIDY LETAPTMPAA
401: CSMPATELRI VSWLGMPVYD ADFGWGKPLV MQRAVQQRAG LVYLADNGGD GGVRVLVSEP APVVEELRRL LGAKI
101: AKALVPFYPL AGRLGVDGDG RPEIDCTRQG ARFVVARSDL AADDFSAREP SPELRRLFVP RDIDDVMLAV QVTFFRCGGV ALGTALHHVA IDALSAFHFF
201: QTWSAFSRDG AGDGAGAGAA TAALELPCHD RTLLRARSPP RVVNPDALSV FLPLKNDPSI PVLEPSGPAV NEIFVLSNDQ VVALKRAYGG ASTFCALSAR
301: VWRCMCAARR LPPDAQTRLT FPANLRHSLR PPLPARYFGN GIILLGAACK VRDVVAAGSG DQAPLASVAG RIRDAVRGLD DELVRSTIDY LETAPTMPAA
401: CSMPATELRI VSWLGMPVYD ADFGWGKPLV MQRAVQQRAG LVYLADNGGD GGVRVLVSEP APVVEELRRL LGAKI
001: MQELPDCLYE ENQPTLITPL SPTPNHSLYL SNLDDHHFLR FSIKYLYLFQ KSISPLTLKD SLSRVLVDYY PFAGRIRVSD EGSKLEVDCN GEGAVFAEAF
101: MDITCQDFVQ LSPKPNKSWR KLLFKVQAQS FLDIPPLVIQ VTYLRCGGMI LCTAINHCLC DGIGTSQFLH AWAHATTSQA HLPTRPFHSR HVLDPRNPPR
201: VTHSHPGFTR TTTVDKSSTF DISKYLQSQP LAPATLTFNQ SHLLRLKKTC APSLKCTTFE ALAANTWRSW AQSLDLPMTM LVKLLFSVNM RKRLTPELPQ
301: GYYGNGFVLA CAESKVQDLV NGNIYHAVKS IQEAKSRITD EYVRSTIDLL EDKTVKTDVS CSLVISQWAK LGLEELDLGG GKPMYMGPLT SDIYCLFLPV
401: ASDNDAIRVQ MSLPEEVVKR LEYCMVKFLD GKDNEDENSR AC
101: MDITCQDFVQ LSPKPNKSWR KLLFKVQAQS FLDIPPLVIQ VTYLRCGGMI LCTAINHCLC DGIGTSQFLH AWAHATTSQA HLPTRPFHSR HVLDPRNPPR
201: VTHSHPGFTR TTTVDKSSTF DISKYLQSQP LAPATLTFNQ SHLLRLKKTC APSLKCTTFE ALAANTWRSW AQSLDLPMTM LVKLLFSVNM RKRLTPELPQ
301: GYYGNGFVLA CAESKVQDLV NGNIYHAVKS IQEAKSRITD EYVRSTIDLL EDKTVKTDVS CSLVISQWAK LGLEELDLGG GKPMYMGPLT SDIYCLFLPV
401: ASDNDAIRVQ MSLPEEVVKR LEYCMVKFLD GKDNEDENSR AC
Arabidopsis Description
At1g27620 [Source:UniProtKB/TrEMBL;Acc:Q9S808]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.