Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 2
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G230700.1 | Wheat | plastid | 96.58 | 96.58 |
HORVU5Hr1G064280.1 | Barley | plastid | 94.75 | 94.75 |
TraesCS5A01G222900.1 | Wheat | cytosol | 66.44 | 90.94 |
EER98918 | Sorghum | cytosol, peroxisome, plastid | 80.37 | 77.7 |
Zm00001d020528_P001 | Maize | cytosol | 76.03 | 75.0 |
TraesCS7B01G054000.1 | Wheat | cytosol | 53.88 | 54.88 |
TraesCS7B01G054100.1 | Wheat | cytosol | 51.83 | 52.91 |
TraesCS6B01G017400.1 | Wheat | cytosol | 51.83 | 52.18 |
TraesCS3B01G350400.1 | Wheat | peroxisome | 50.23 | 49.89 |
TraesCS5B01G221700.1 | Wheat | cytosol | 47.26 | 47.7 |
TraesCS7B01G455100.1 | Wheat | cytosol | 46.58 | 47.22 |
TraesCS3B01G486400.1 | Wheat | cytosol | 42.01 | 42.4 |
TraesCS5B01G461000.1 | Wheat | peroxisome | 43.84 | 42.38 |
TraesCS3B01G545700.1 | Wheat | cytosol, peroxisome, plastid | 41.55 | 41.46 |
TraesCS3B01G574700.1 | Wheat | peroxisome | 40.87 | 40.96 |
TraesCS6B01G249400.1 | Wheat | cytosol, golgi | 40.87 | 40.59 |
TraesCS3B01G485500.1 | Wheat | cytosol | 40.41 | 40.32 |
TraesCS6B01G288300.1 | Wheat | peroxisome | 39.73 | 39.82 |
TraesCS5B01G038600.1 | Wheat | cytosol | 40.41 | 39.78 |
TraesCS3B01G488100.1 | Wheat | peroxisome | 39.27 | 39.72 |
TraesCS2B01G374600.1 | Wheat | mitochondrion | 39.5 | 39.5 |
TraesCS6B01G030300.1 | Wheat | peroxisome | 39.5 | 39.41 |
TraesCS6B01G030800.1 | Wheat | peroxisome | 38.81 | 38.72 |
TraesCS6B01G030200.1 | Wheat | cytosol | 11.64 | 38.64 |
TraesCS3B01G002000.1 | Wheat | mitochondrion | 37.67 | 37.84 |
TraesCS3B01G485400.1 | Wheat | plasma membrane | 39.27 | 36.83 |
TraesCS1B01G005300.1 | Wheat | mitochondrion | 29.22 | 32.16 |
TraesCS6B01G412900.1 | Wheat | peroxisome | 29.0 | 28.8 |
TraesCS5B01G336600.1 | Wheat | cytosol | 28.31 | 28.57 |
TraesCS4B01G302200.1 | Wheat | mitochondrion, peroxisome | 28.08 | 28.41 |
TraesCS2B01G518300.1 | Wheat | cytosol | 28.54 | 28.34 |
TraesCS5B01G336300.1 | Wheat | cytosol | 28.08 | 28.34 |
TraesCS5B01G336500.1 | Wheat | cytosol | 28.08 | 28.34 |
TraesCS5B01G336700.1 | Wheat | cytosol | 28.08 | 28.34 |
TraesCS5B01G304300.1 | Wheat | cytosol | 27.85 | 27.98 |
TraesCS2B01G519100.1 | Wheat | cytosol | 28.08 | 27.95 |
TraesCS4B01G302100.1 | Wheat | cytosol | 27.4 | 27.84 |
TraesCS2B01G606400.1 | Wheat | cytosol | 26.94 | 27.57 |
TraesCS5B01G337100.1 | Wheat | cytosol | 27.63 | 27.44 |
TraesCS5B01G337000.1 | Wheat | cytosol | 27.63 | 27.44 |
TraesCS2B01G518900.1 | Wheat | cytosol | 27.63 | 27.44 |
TraesCS4B01G026800.1 | Wheat | cytosol | 27.85 | 27.42 |
TraesCS1B01G107500.1 | Wheat | cytosol | 27.17 | 27.17 |
TraesCS1B01G107400.1 | Wheat | cytosol | 27.17 | 27.17 |
TraesCS4B01G302000.1 | Wheat | cytosol, extracellular, peroxisome | 26.71 | 27.15 |
TraesCS4B01G384800.1 | Wheat | cytosol | 26.71 | 27.15 |
TraesCS7B01G410100.1 | Wheat | cytosol | 27.17 | 27.05 |
TraesCS6B01G430300.1 | Wheat | cytosol | 27.63 | 26.89 |
TraesCS5B01G136200.1 | Wheat | plastid | 26.71 | 26.83 |
TraesCS1B01G107300.1 | Wheat | cytosol | 26.48 | 26.73 |
TraesCS2B01G604000.1 | Wheat | cytosol | 26.03 | 25.73 |
TraesCS6B01G322500.1 | Wheat | cytosol | 26.03 | 25.5 |
TraesCS4B01G302300.1 | Wheat | cytosol | 23.52 | 24.01 |
TraesCS2B01G604100.1 | Wheat | peroxisome | 23.97 | 23.33 |
TraesCS3B01G234500.1 | Wheat | cytosol | 21.0 | 21.85 |
Protein Annotations
EnsemblPlants:TraesCS5B01G222000.1 | EnsemblPlantsGene:TraesCS5B01G222000 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF23 |
PFAM:PF02458 | SEG:seg | MapMan:50.2.3 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:396621369..396623209
Molecular Weight (calculated)
46867.1 Da
IEP (calculated)
7.559
GRAVY (calculated)
0.062
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVQVVTSEL VAPSEATPRR ALWLSNLDLG ARNGYSPTVY FFRAPDRGDG KAESFFSAGV LRAALARALV PFHPFAGRLG AGRHGRAEID CNDEGALFVV
101: ARSEAALDDF EGFAPSKAMR DMFVPPYDNA GAGAPLLMLQ VTFFRCGGVA LGTAMHHFVI DGRSAFHFIQ TWASIARGDA SATVLPSLDR TPLRARSPPT
201: VHFDHSREYR LTAPASTDPP VAGGVKPSLE YASAILRVTG AQAAALRARA GAPCVSTFRA LVAHVWRCAC AARSLAPDAE SRLYTMIDMR ARLSPPLPDA
301: YFGNAVVRTS VSARVGDLLS GPLGFGARRL RAATGQGDEY ARSVVDYLET ADMGALPRSG LPGTDLRVIS WMGMPSHDAD FGWGEPAFLA PALMFYPGFV
401: YLMSCPGKGG DVAVAVSLEP DRLARFKELF FEEMAAME
101: ARSEAALDDF EGFAPSKAMR DMFVPPYDNA GAGAPLLMLQ VTFFRCGGVA LGTAMHHFVI DGRSAFHFIQ TWASIARGDA SATVLPSLDR TPLRARSPPT
201: VHFDHSREYR LTAPASTDPP VAGGVKPSLE YASAILRVTG AQAAALRARA GAPCVSTFRA LVAHVWRCAC AARSLAPDAE SRLYTMIDMR ARLSPPLPDA
301: YFGNAVVRTS VSARVGDLLS GPLGFGARRL RAATGQGDEY ARSVVDYLET ADMGALPRSG LPGTDLRVIS WMGMPSHDAD FGWGEPAFLA PALMFYPGFV
401: YLMSCPGKGG DVAVAVSLEP DRLARFKELF FEEMAAME
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.