Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G078900.1 | Wheat | peroxisome | 100.0 | 76.99 |
| TraesCS6B01G030300.1 | Wheat | peroxisome | 92.31 | 71.07 |
| TraesCS6D01G025800.1 | Wheat | peroxisome | 90.83 | 70.09 |
| TraesCS6B01G030800.1 | Wheat | peroxisome | 89.35 | 68.79 |
| TraesCSU01G078600.1 | Wheat | peroxisome | 86.69 | 66.74 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 69.82 | 53.88 |
| TraesCSU01G079000.1 | Wheat | peroxisome | 69.82 | 51.3 |
| TraesCSU01G235600.1 | Wheat | cytosol | 64.2 | 49.21 |
| TraesCSU01G148700.1 | Wheat | peroxisome | 65.09 | 47.62 |
| TraesCSU01G078800.1 | Wheat | peroxisome | 49.41 | 46.52 |
| TraesCSU01G220000.1 | Wheat | cytosol | 34.02 | 42.75 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 10.65 | 23.08 |
| TraesCSU01G038200.1 | Wheat | peroxisome | 22.49 | 16.93 |
| TraesCSU01G078700.1 | Wheat | cytosol | 7.1 | 16.44 |
| TraesCSU01G244500.1 | Wheat | cytosol | 6.8 | 12.64 |
Protein Annotations
| EnsemblPlants:TraesCSU01G217900.1 | EnsemblPlantsGene:TraesCSU01G217900 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | SUPFAM:SSF52777 | MapMan:50.2.3 | : | : | : |
Description
No Description!
Coordinates
chrUn:+:321359234..321360738
Molecular Weight (calculated)
37667.2 Da
IEP (calculated)
8.056
GRAVY (calculated)
-0.104
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHSRLTMDD FSDFKPSTKQ RRLFVPHVSD SDDLLWATQV TFLKWGGVVL GSAIHHAAMD GSAVFHFLRT WSAFSRDGDR AMVNLPCHDR SRLCARDPPV
101: VHPDALSIFS PKINLPPQPG PLVNEVVAFT LGKDQLSTLK HISGGDSVST FSAVSAHLWQ CMCLARQLPP DAATQLMFSA NVRRIMRPPL PDGYFGNAII
201: NLSVGDNVHA ITSRELSYIA QRIRDTHRRV NDELVHSAID YLELAKRDDE RPATGNLPVT VIRVVSWLGM PSYDADFSWG RPLAMFRAEP NRGGFVHLID
301: SAQGDGSVRI IMSIEAAILS ELKRLLYAKF DNMLYSKF
101: VHPDALSIFS PKINLPPQPG PLVNEVVAFT LGKDQLSTLK HISGGDSVST FSAVSAHLWQ CMCLARQLPP DAATQLMFSA NVRRIMRPPL PDGYFGNAII
201: NLSVGDNVHA ITSRELSYIA QRIRDTHRRV NDELVHSAID YLELAKRDDE RPATGNLPVT VIRVVSWLGM PSYDADFSWG RPLAMFRAEP NRGGFVHLID
301: SAQGDGSVRI IMSIEAAILS ELKRLLYAKF DNMLYSKF
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.