Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G078900.1 | Wheat | peroxisome | 67.57 | 67.88 |
| TraesCSU01G078600.1 | Wheat | peroxisome | 66.21 | 66.51 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 65.53 | 65.98 |
| TraesCSU01G079000.1 | Wheat | peroxisome | 67.35 | 64.57 |
| TraesCSU01G217900.1 | Wheat | peroxisome | 49.21 | 64.2 |
| TraesCSU01G220000.1 | Wheat | cytosol | 38.1 | 62.45 |
| TraesCSU01G078700.1 | Wheat | cytosol | 19.95 | 60.27 |
| TraesCSU01G148700.1 | Wheat | peroxisome | 62.81 | 59.96 |
| TraesCSU01G078800.1 | Wheat | peroxisome | 48.07 | 59.05 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 9.3 | 26.28 |
| TraesCSU01G244500.1 | Wheat | cytosol | 10.66 | 25.82 |
| TraesCSU01G038200.1 | Wheat | peroxisome | 22.22 | 21.83 |
Protein Annotations
| EnsemblPlants:TraesCSU01G235600.1 | EnsemblPlantsGene:TraesCSU01G235600 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | MapMan:50.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:348464150..348465826
Molecular Weight (calculated)
49245.5 Da
IEP (calculated)
7.217
GRAVY (calculated)
0.004
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEEEVRVV ESCFVTPAAD TPSRALRLSR LDLMLVHGGY TPVVHFYRPR TGDETTSGDF FDVTRLKTAL SKALVPFYPL AGRFKEGVDG RMEIDCNGKG
101: MLFLVAHSGH VQWCYLNFEP SPKQRRLFVP HIDGSAGLLC AIQVTFLKCG SVVLGMATHH GALDGTAMFH FLQTWTAFSR DGDRALVDLP CHDRSRLYAR
201: DPPVVHPDAL FVFCPKMILS QTSIVNKLEV FTVRKDHLST LKLTCGGVST FSALTAHTWQ CMCLARRLPP DSTTRLAFMA NVRRRMTPPL PDGYFGNAII
301: NINVAEEAQS ITCGDLAFVA RRIKDTISRV DDELVHSAVD YVELALAERD NRHTPAMGNL PVTDIRVVNW LGLPFYDLDF SWGKPFAVMR AESSRGGLVH
401: LMNSTQGDGS VQLLIYTEAA ILMEFKRLFY AKFDDMLHSE F
101: MLFLVAHSGH VQWCYLNFEP SPKQRRLFVP HIDGSAGLLC AIQVTFLKCG SVVLGMATHH GALDGTAMFH FLQTWTAFSR DGDRALVDLP CHDRSRLYAR
201: DPPVVHPDAL FVFCPKMILS QTSIVNKLEV FTVRKDHLST LKLTCGGVST FSALTAHTWQ CMCLARRLPP DSTTRLAFMA NVRRRMTPPL PDGYFGNAII
301: NINVAEEAQS ITCGDLAFVA RRIKDTISRV DDELVHSAVD YVELALAERD NRHTPAMGNL PVTDIRVVNW LGLPFYDLDF SWGKPFAVMR AESSRGGLVH
401: LMNSTQGDGS VQLLIYTEAA ILMEFKRLFY AKFDDMLHSE F
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.