Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G220000.1 | Wheat | cytosol | 69.86 | 37.92 |
| TraesCSU01G078800.1 | Wheat | peroxisome | 78.08 | 31.75 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 71.23 | 23.74 |
| TraesCSU01G148700.1 | Wheat | peroxisome | 73.29 | 23.16 |
| TraesCSU01G079000.1 | Wheat | peroxisome | 72.6 | 23.04 |
| TraesCSU01G078900.1 | Wheat | peroxisome | 68.49 | 22.78 |
| TraesCSU01G078600.1 | Wheat | peroxisome | 67.81 | 22.55 |
| TraesCSU01G235600.1 | Wheat | cytosol | 60.27 | 19.95 |
| TraesCSU01G244500.1 | Wheat | cytosol | 19.86 | 15.93 |
| TraesCSU01G217900.1 | Wheat | peroxisome | 16.44 | 7.1 |
| TraesCSU01G038200.1 | Wheat | peroxisome | 19.18 | 6.24 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCSU01G078700.1 | EnsemblPlantsGene:TraesCSU01G078700 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:71183952..71184392
Molecular Weight (calculated)
16248.9 Da
IEP (calculated)
7.922
GRAVY (calculated)
0.147
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEEEVQVV ESCFVTPAVD TLRKALWLSA LDLMLANRGY TPLVHFYRRC PGTETTDDFF SVTKLKTALG KALVGFYPMA GRLRVDANGR LEIDCNSKGM
101: IFLVARSQLT IDDFSDLKPS PRLRRLFVPQ MLSAEVCATQ VSLILT
101: IFLVARSQLT IDDFSDLKPS PRLRRLFVPQ MLSAEVCATQ VSLILT
001: MGSSYQESPP LLLEDLKVTI KESTLIFPSE ETSERKSMFL SNVDQILNFD VQTVHFFRPN KEFPPEMVSE KLRKALVKLM DAYEFLAGRL RVDPSSGRLD
101: VDCNGAGAGF VTAASDYTLE ELGDLVYPNP AFAQLVTSQL QSLPKDDQPL FVFQEERKKK SKVLSV
101: VDCNGAGAGF VTAASDYTLE ELGDLVYPNP AFAQLVTSQL QSLPKDDQPL FVFQEERKKK SKVLSV
Arabidopsis Description
GLC [Source:UniProtKB/TrEMBL;Acc:A0A178W297]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.