Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G022900.1 | Wheat | cytosol, plasma membrane, plastid | 64.46 | 93.71 |
| TraesCSU01G078900.1 | Wheat | peroxisome | 87.7 | 87.7 |
| TraesCSU01G217900.1 | Wheat | peroxisome | 66.74 | 86.69 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 70.61 | 70.78 |
| TraesCSU01G220000.1 | Wheat | cytosol | 42.6 | 69.52 |
| TraesCSU01G079000.1 | Wheat | peroxisome | 71.98 | 68.7 |
| TraesCSU01G078700.1 | Wheat | cytosol | 22.55 | 67.81 |
| TraesCSU01G235600.1 | Wheat | cytosol | 66.51 | 66.21 |
| TraesCSU01G148700.1 | Wheat | peroxisome | 68.34 | 64.94 |
| TraesCSU01G078800.1 | Wheat | peroxisome | 52.62 | 64.35 |
| TraesCSU01G244500.1 | Wheat | cytosol | 10.48 | 25.27 |
| TraesCSU01G241400.1 | Wheat | mitochondrion | 8.43 | 23.72 |
| TraesCSU01G038200.1 | Wheat | peroxisome | 23.92 | 23.39 |
Protein Annotations
| EnsemblPlants:TraesCSU01G078600.1 | EnsemblPlantsGene:TraesCSU01G078600 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | SEG:seg | SUPFAM:SSF52777 | MapMan:50.2.3 | : | : |
Description
No Description!
Coordinates
chrUn:+:71180984..71182531
Molecular Weight (calculated)
48916.9 Da
IEP (calculated)
7.775
GRAVY (calculated)
-0.056
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEEEVQVV ESSFVTPAAD TPSRALPLSP FDLMLANRGY TPLVHFYRRP ETACDDFFDV TRLKTALGKA LVPFYPLAGR LRAGADSRLQ IDCNGKGMLF
101: LVAQCRLTMD DFNDFKPSSK QRRLFVPHVD NSDGLLWAAQ VTFLKCGGVV LGSATHHAAM DGSVVFHFFR TWSAFSRDGD RAMVNLPCHD RTRLCARDPP
201: VVHPEALAVF SPNINLPPQP GHVVNEVVVF TLSKDQLSTL KRISGGDAVS TFSAVSAHLW QCMCLARMLP PDATTQLMFS ANIRRIMRPP LPDGYFGNAI
301: INLSVTDKVR DISSCELTYI VRRIRDTHSR VNNELVHSAI DYLELTKRDD ERPAAGNLPV TDIRVVSWLG MPSYDADFSW GRPLAMFRAE PNRGGFVHLI
401: DSAEGDGSVR IIMSIEVAIL SEFKRLLYAK FNNMLYSKF
101: LVAQCRLTMD DFNDFKPSSK QRRLFVPHVD NSDGLLWAAQ VTFLKCGGVV LGSATHHAAM DGSVVFHFFR TWSAFSRDGD RAMVNLPCHD RTRLCARDPP
201: VVHPEALAVF SPNINLPPQP GHVVNEVVVF TLSKDQLSTL KRISGGDAVS TFSAVSAHLW QCMCLARMLP PDATTQLMFS ANIRRIMRPP LPDGYFGNAI
301: INLSVTDKVR DISSCELTYI VRRIRDTHSR VNNELVHSAI DYLELTKRDD ERPAAGNLPV TDIRVVSWLG MPSYDADFSW GRPLAMFRAE PNRGGFVHLI
401: DSAEGDGSVR IIMSIEVAIL SEFKRLLYAK FNNMLYSKF
001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I
Arabidopsis Description
SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.