Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G078600.1 | Wheat | peroxisome | 93.71 | 64.46 |
| TraesCS7A01G018100.1 | Wheat | cytosol | 61.26 | 45.79 |
| HORVU6Hr1G012740.1 | Barley | peroxisome | 66.23 | 45.66 |
| TraesCS6A01G022100.1 | Wheat | peroxisome | 63.91 | 41.77 |
| TraesCS4A01G473500.1 | Wheat | mitochondrion, plastid | 61.59 | 38.67 |
| TraesCS6A01G336100.1 | Wheat | cytosol | 51.66 | 37.05 |
| TraesCS3A01G506800.1 | Wheat | peroxisome | 52.98 | 35.87 |
| TraesCS3A01G507100.1 | Wheat | peroxisome | 49.34 | 35.06 |
| TraesCS6A01G260900.1 | Wheat | peroxisome | 48.34 | 33.33 |
| TraesCS2A01G040800.1 | Wheat | cytosol | 47.68 | 31.86 |
| TraesCS7A01G537300.1 | Wheat | cytosol | 44.7 | 31.03 |
| TraesCS5A01G222700.1 | Wheat | cytosol | 44.37 | 30.8 |
| TraesCS7A01G150000.1 | Wheat | cytosol | 38.41 | 26.91 |
| TraesCS2A01G040600.1 | Wheat | cytosol | 39.07 | 26.76 |
| TraesCS7A01G150200.1 | Wheat | cytosol | 37.75 | 26.57 |
| TraesCS3A01G517500.1 | Wheat | mitochondrion | 36.09 | 24.44 |
| TraesCS2A01G354500.1 | Wheat | mitochondrion | 35.76 | 24.43 |
| TraesCS6A01G232200.1 | Wheat | cytosol | 35.43 | 24.21 |
| TraesCS5A01G222900.1 | Wheat | cytosol | 22.19 | 20.94 |
| TraesCS5A01G549100.1 | Wheat | cytosol | 17.55 | 20.46 |
| TraesCS4A01G002900.1 | Wheat | cytosol, extracellular, peroxisome | 19.54 | 19.28 |
| TraesCS2A01G490000.1 | Wheat | cytosol | 26.16 | 17.91 |
| TraesCS6A01G375300.1 | Wheat | mitochondrion | 26.49 | 17.66 |
| TraesCS4A01G285200.1 | Wheat | cytosol | 26.82 | 17.42 |
| TraesCS1A01G088400.1 | Wheat | cytosol | 25.17 | 17.35 |
| TraesCS4A01G287500.1 | Wheat | cytosol | 26.49 | 17.2 |
| TraesCS1A01G088300.1 | Wheat | cytosol | 24.83 | 17.12 |
| TraesCS4A01G003300.1 | Wheat | cytosol, extracellular, peroxisome | 23.84 | 16.71 |
| TraesCS7A01G148300.1 | Wheat | peroxisome | 24.5 | 16.63 |
| TraesCS2A01G570600.1 | Wheat | cytosol | 23.84 | 16.4 |
| TraesCS4A01G003400.1 | Wheat | cytosol | 22.85 | 16.27 |
| TraesCS4A01G003100.1 | Wheat | peroxisome | 23.84 | 15.96 |
| TraesCS6A01G292100.1 | Wheat | cytosol | 22.85 | 15.58 |
| TraesCS2A01G490700.1 | Wheat | plastid | 25.83 | 15.57 |
| TraesCS5A01G338700.1 | Wheat | cytosol | 21.52 | 14.81 |
| TraesCS5A01G137500.1 | Wheat | plastid | 21.85 | 14.67 |
| TraesCS5A01G338600.1 | Wheat | cytosol | 21.19 | 14.51 |
| TraesCS7A01G023200.1 | Wheat | plastid | 13.24 | 14.04 |
| TraesCS5A01G304000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 19.54 | 13.63 |
| TraesCS5A01G337500.1 | Wheat | cytosol | 19.54 | 13.59 |
| TraesCS5A01G337900.1 | Wheat | cytosol | 19.21 | 13.36 |
| TraesCS5A01G337800.1 | Wheat | cytosol | 18.54 | 12.9 |
| TraesCS5A01G337700.1 | Wheat | cytosol | 18.21 | 12.67 |
| TraesCS4A01G287700.1 | Wheat | mitochondrion | 3.97 | 7.69 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G022900.1 | EnsemblPlantsGene:TraesCS6A01G022900 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF16 |
| PFAM:PF02458 | SUPFAM:SSF52777 | MapMan:50.2.3 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:11433070..11434111
Molecular Weight (calculated)
33675.9 Da
IEP (calculated)
8.497
GRAVY (calculated)
0.027
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSQLPLSPF DLMLANRGYT PLVHFYRRPE TACDDFFDVT RLKTALGRAL VPFYPLVGRL RAGTDDRLQI DCNGKGMLFL VAQSRLTMDD FSDFKPSSKQ
101: RRLFVPHVDN SDGLLWAAQV TFLKCGGVVL GSATHHAAMD GSVVFHFFRT WSAFSRDGDW AMVNLPCHGR TRLCACDPPI VHPEALAVFS PNINLPPQPG
201: HVVNEVVVFT LSKDQLSSLK RISGGDAMST FSAVSAHLWQ CMCLARMLRP DATTQLMFSA NIRRIMRPPL LDGYFGNAII NLSVTDKVRD ISSCEQLTYI
301: MR
101: RRLFVPHVDN SDGLLWAAQV TFLKCGGVVL GSATHHAAMD GSVVFHFFRT WSAFSRDGDW AMVNLPCHGR TRLCACDPPI VHPEALAVFS PNINLPPQPG
201: HVVNEVVVFT LSKDQLSSLK RISGGDAMST FSAVSAHLWQ CMCLARMLRP DATTQLMFSA NIRRIMRPPL LDGYFGNAII NLSVTDKVRD ISSCEQLTYI
301: MR
001: MKINIRDSTM VRPATETPIT NLWNSNVDLV IPRFHTPSVY FYRPTGASNF FDPQVMKEAL SKALVPFYPM AGRLKRDDDG RIEIDCNGAG VLFVVADTPS
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
101: VIDDFGDFAP TLNLRQLIPE VDHSAGIHSF PLLVLQVTFF KCGGASLGVG MQHHAADGFS GLHFINTWSD MARGLDLTIP PFIDRTLLRA RDPPQPAFHH
201: VEYQPAPSMK IPLDPSKSGP ENTTVSIFKL TRDQLVALKA KSKEDGNTVS YSSYEMLAGH VWRSVGKARG LPNDQETKLY IATDGRSRLR PQLPPGYFGN
301: VIFTATPLAV AGDLLSKPTW YAAGQIHDFL VRMDDNYLRS ALDYLEMQPD LSALVRGAHT YKCPNLGITS WVRLPIYDAD FGWGRPIFMG PGGIPYEGLS
401: FVLPSPTNDG SLSVAIALQS EHMKLFEKFL FEI
Arabidopsis Description
HSTShikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.