Factsheet for TraesCS4A01G473500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

peroxisome 1
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G015400.1	Wheat	peroxisome	85.24	92.13
TraesCS7A01G018100.1	Wheat	cytosol	73.6	87.62
TraesCS6A01G022100.1	Wheat	peroxisome	65.49	68.18
TraesCS6A01G022900.1	Wheat	cytosol, plasma membrane, plastid	38.67	61.59
TraesCS3A01G507100.1	Wheat	peroxisome	48.65	55.06
TraesCS3A01G506800.1	Wheat	peroxisome	50.94	54.93
TraesCS6A01G336100.1	Wheat	cytosol	46.78	53.44
TraesCS6A01G260900.1	Wheat	peroxisome	43.24	47.49
TraesCS2A01G040800.1	Wheat	cytosol	43.87	46.68
TraesCS7A01G537300.1	Wheat	cytosol	37.63	41.61
TraesCS5A01G222700.1	Wheat	cytosol	36.38	40.23
TraesCS7A01G150000.1	Wheat	cytosol	33.68	37.59
TraesCS7A01G150200.1	Wheat	cytosol	33.06	37.06
TraesCS5A01G222900.1	Wheat	cytosol	24.53	36.88
TraesCS3A01G517500.1	Wheat	mitochondrion	33.26	35.87
TraesCS2A01G040600.1	Wheat	cytosol	31.39	34.24
TraesCS2A01G354500.1	Wheat	mitochondrion	31.18	33.94
TraesCS6A01G232200.1	Wheat	cytosol	30.56	33.26
TraesCS2A01G490000.1	Wheat	cytosol	23.91	26.08
TraesCS6A01G375300.1	Wheat	mitochondrion	23.7	25.17
TraesCS4A01G287700.1	Wheat	mitochondrion	8.11	25.0
TraesCS2A01G570600.1	Wheat	cytosol	22.66	24.83
TraesCS4A01G285200.1	Wheat	cytosol	23.91	24.73
TraesCS4A01G287500.1	Wheat	cytosol	23.7	24.52
TraesCS4A01G003300.1	Wheat	cytosol, extracellular, peroxisome	21.62	24.13
TraesCS4A01G003400.1	Wheat	cytosol	21.21	24.06
TraesCS7A01G148300.1	Wheat	peroxisome	22.25	24.04
TraesCS7A01G023200.1	Wheat	plastid	14.14	23.86
TraesCS4A01G002900.1	Wheat	cytosol, extracellular, peroxisome	15.18	23.86
TraesCS2A01G490700.1	Wheat	plastid	24.74	23.75
TraesCS4A01G003100.1	Wheat	peroxisome	22.04	23.5
TraesCS5A01G338700.1	Wheat	cytosol	21.41	23.46
TraesCS5A01G338600.1	Wheat	cytosol	21.41	23.36
TraesCS1A01G088300.1	Wheat	cytosol	21.21	23.29
TraesCS1A01G088400.1	Wheat	cytosol	21.0	23.06
TraesCS6A01G292100.1	Wheat	cytosol	21.0	22.8
TraesCS5A01G304000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	20.37	22.63
TraesCS5A01G337900.1	Wheat	cytosol	20.17	22.35
TraesCS5A01G337500.1	Wheat	cytosol	20.17	22.35
TraesCS5A01G337800.1	Wheat	cytosol	19.96	22.12
TraesCS5A01G549100.1	Wheat	cytosol	11.85	22.01
TraesCS5A01G337700.1	Wheat	cytosol	19.75	21.89
TraesCS5A01G137500.1	Wheat	plastid	19.54	20.89

Protein Annotations

EnsemblPlants:TraesCS4A01G473500.1	EnsemblPlantsGene:TraesCS4A01G473500	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	MapMan:50.2.3	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:733558732..733560366

Molecular Weight (calculated)

53747.4 Da

IEP (calculated)

9.271

GRAVY (calculated)

-0.060

Length

481 amino acids

Sequence
(BLAST)

001: MSKIFVFKSL LLGAHIHQSS TRRKKENGRG EQERGRMAAS EEGVRVVESC FVKPAADTPR KAIWLSPLDI MLARRGYTPL IHFYRPCVDQ TSAQDFFDVT
101: RLKSALGKAL VAFYPMAGRL RVDVHGRLEI DCNGKGMLFL VAYSRLTIDD FRDLKPSSKL RRFFVPCMDD SSDILCATQV TFFKCGGVAL GTATHQGAMD
201: GTTAFHFFQT WSAFSRDGDR DVVKFPYLDR TLLCARDPPI IHPDTLSLFC LKTTNLSRPP APGPVVVNEV FTLCKDQISA LKHMCGGGRV STFSAVSAYM
301: WRCMCLARRL PPDSTTRLEF LANFRRSIAP PLPDGYLGNA MLQVSVADKT WDVVSRDLAH VAHRIRGTLG RVNDELVRSA VDYLELDLAE RDNGPAIGVL
401: PATDLCVVSW LGMPLYDVDF GWGKPLAMLR AEQNRRGFVL MMNGARGDGS VRLSMSIEAA ILKEFQRLFY IKLDSKVYSK F

Best Arabidopsis Sequence Match ( AT2G19070.1 )
(BLAST)

001: MAPITFRKSY TIVPAEPTWS GRFPLAEWDQ VGTITHIPTL YFYDKPSESF QGNVVEILKT SLSRVLVHFY PMAGRLRWLP RGRFELNCNA EGVEFIEAES
101: EGKLSDFKDF SPTPEFENLM PQVNYKNPIE TIPLFLAQVT KFKCGGISLS VNVSHAIVDG QSALHLISEW GRLARGEPLE TVPFLDRKIL WAGEPLPPFV
201: SPPKFDHKEF DQPPFLIGET DNVEERKKKT IVVMLPLSTS QLQKLRSKAN GSKHSDPAKG FTRYETVTGH VWRCACKARG HSPEQPTALG ICIDTRSRME
301: PPLPRGYFGN ATLDVVAAST SGELISNELG FAASLISKAI KNVTNEYVMI GIEYLKNQKD LKKFQDLHAL GSTEGPFYGN PNLGVVSWLT LPMYGLDFGW
401: GKEFYTGPGT HDFDGDSLIL PDQNEDGSVI LATCLQVAHM EAFKKHFYED I

Arabidopsis Description

SHTSpermidine hydroxycinnamoyl transferase [Source:UniProtKB/Swiss-Prot;Acc:O64470]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.