Factsheet for TraesCS6A01G022100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G148700.1	Wheat	peroxisome	96.1	96.1
HORVU6Hr1G012740.1	Barley	peroxisome	70.13	73.97
TraesCS7A01G018100.1	Wheat	cytosol	59.09	67.57
TraesCS4A01G473500.1	Wheat	mitochondrion, plastid	68.18	65.49
TraesCS6A01G022900.1	Wheat	cytosol, plasma membrane, plastid	41.77	63.91
TraesCS3A01G506800.1	Wheat	peroxisome	53.68	55.61
TraesCS3A01G507100.1	Wheat	peroxisome	51.08	55.53
TraesCS6A01G336100.1	Wheat	cytosol	50.0	54.87
TraesCS6A01G260900.1	Wheat	peroxisome	45.02	47.49
TraesCS2A01G040800.1	Wheat	cytosol	44.16	45.13
TraesCS7A01G537300.1	Wheat	cytosol	38.1	40.46
TraesCS5A01G222700.1	Wheat	cytosol	36.8	39.08
TraesCS2A01G040600.1	Wheat	cytosol	34.63	36.28
TraesCS7A01G150000.1	Wheat	cytosol	33.12	35.5
TraesCS7A01G150200.1	Wheat	cytosol	32.9	35.43
TraesCS2A01G354500.1	Wheat	mitochondrion	32.25	33.71
TraesCS6A01G232200.1	Wheat	cytosol	32.03	33.48
TraesCS5A01G222900.1	Wheat	cytosol	22.73	32.81
TraesCS3A01G517500.1	Wheat	mitochondrion	31.6	32.74
TraesCS2A01G490000.1	Wheat	cytosol	24.46	25.62
TraesCS4A01G002900.1	Wheat	cytosol, extracellular, peroxisome	16.45	24.84
TraesCS4A01G003300.1	Wheat	cytosol, extracellular, peroxisome	23.16	24.83
TraesCS4A01G287700.1	Wheat	mitochondrion	8.23	24.36
TraesCS7A01G023200.1	Wheat	plastid	14.94	24.21
TraesCS6A01G375300.1	Wheat	mitochondrion	23.59	24.06
TraesCS1A01G088300.1	Wheat	cytosol	22.73	23.97
TraesCS4A01G003400.1	Wheat	cytosol	21.86	23.82
TraesCS1A01G088400.1	Wheat	cytosol	22.51	23.74
TraesCS2A01G570600.1	Wheat	cytosol	22.51	23.69
TraesCS4A01G285200.1	Wheat	cytosol	23.81	23.66
TraesCS7A01G148300.1	Wheat	peroxisome	22.73	23.6
TraesCS4A01G003100.1	Wheat	peroxisome	22.94	23.5
TraesCS4A01G287500.1	Wheat	cytosol	23.59	23.44
TraesCS5A01G338700.1	Wheat	cytosol	22.08	23.23
TraesCS5A01G549100.1	Wheat	cytosol	12.99	23.17
TraesCS2A01G490700.1	Wheat	plastid	24.89	22.95
TraesCS5A01G338600.1	Wheat	cytosol	21.86	22.9
TraesCS5A01G304000.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	21.43	22.86
TraesCS5A01G337800.1	Wheat	cytosol	21.43	22.81
TraesCS5A01G337500.1	Wheat	cytosol	21.21	22.58
TraesCS5A01G337700.1	Wheat	cytosol	21.21	22.58
TraesCS5A01G337900.1	Wheat	cytosol	21.21	22.58
TraesCS5A01G137500.1	Wheat	plastid	21.21	21.78
TraesCS6A01G292100.1	Wheat	cytosol	20.78	21.67

Protein Annotations

EnsemblPlants:TraesCS6A01G022100.1	EnsemblPlantsGene:TraesCS6A01G022100	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31642	PANTHER:PTHR31642:SF16
PFAM:PF02458	MapMan:50.2.3	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:11114665..11116444

Molecular Weight (calculated)

51199.8 Da

IEP (calculated)

8.475

GRAVY (calculated)

-0.108

Length

462 amino acids

Sequence
(BLAST)

001: MSNEVASTRR KKENGTSKAG RRNSYCGMAG EEEVQVVESC FVTPAKDTPR KALRLSPLDL LMLANRGYTP LVHFYRRRCS VDDFFDVAKL KTALGKALVP
101: FYPMAGRLRA DADGRLEIDC NGEGMPFLVA HCHLTVDDFS EFKPSPRLRG LFVPHTDDSE GIVCSTQVTF LKCGGVALGT AVHHGAMDGT AAFHFFQTWS
201: AFSREGDWAV MKTPYHDRSL LFARNPPFVH PDTLSIFCLK VNMSQLSGPV VNEVFTLGKG QVSTLKRICG GDMSTFSVVS AHMWQCMCLA RRLPPNCTTR
301: LVFPANVRRS MTPPLPDGYF GNAITYVSVA NEARGIASGD LAYIVRRIRD SLSRVDDELV HSAVDYLELA KTDNRPATGS LPATDMRVVS WLGMPVYDVD
401: FSWGKPLAML RAESNRGGYV HLIDSGHGDG SIRLVMCIEA SILKEFKRLL YAKFESMVYS KF

Best Arabidopsis Sequence Match ( AT1G27620.1 )
(BLAST)

001: MQELPDCLYE ENQPTLITPL SPTPNHSLYL SNLDDHHFLR FSIKYLYLFQ KSISPLTLKD SLSRVLVDYY PFAGRIRVSD EGSKLEVDCN GEGAVFAEAF
101: MDITCQDFVQ LSPKPNKSWR KLLFKVQAQS FLDIPPLVIQ VTYLRCGGMI LCTAINHCLC DGIGTSQFLH AWAHATTSQA HLPTRPFHSR HVLDPRNPPR
201: VTHSHPGFTR TTTVDKSSTF DISKYLQSQP LAPATLTFNQ SHLLRLKKTC APSLKCTTFE ALAANTWRSW AQSLDLPMTM LVKLLFSVNM RKRLTPELPQ
301: GYYGNGFVLA CAESKVQDLV NGNIYHAVKS IQEAKSRITD EYVRSTIDLL EDKTVKTDVS CSLVISQWAK LGLEELDLGG GKPMYMGPLT SDIYCLFLPV
401: ASDNDAIRVQ MSLPEEVVKR LEYCMVKFLD GKDNEDENSR AC

Arabidopsis Description

At1g27620 [Source:UniProtKB/TrEMBL;Acc:Q9S808]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.