Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88645 | Canola | cytosol, golgi, nucleus | 39.96 | 85.39 |
| CDX88644 | Canola | cytosol | 38.17 | 81.76 |
| AT5G57840.1 | Thale cress | cytosol | 33.44 | 71.78 |
| Solyc07g005760.2.1 | Tomato | cytosol | 18.82 | 41.63 |
| PGSC0003DMT400029079 | Potato | cytosol | 15.25 | 40.28 |
| CDY31956 | Canola | cytosol | 18.19 | 39.95 |
| CDY22880 | Canola | mitochondrion | 17.98 | 39.95 |
| CDY05770 | Canola | cytosol | 18.09 | 39.72 |
| VIT_11s0037g00440.t01 | Wine grape | cytosol | 17.98 | 39.49 |
| CDY44162 | Canola | plastid | 17.77 | 39.49 |
| CDY66506 | Canola | cytosol | 13.46 | 28.96 |
| CDY03367 | Canola | cytosol | 13.25 | 27.94 |
| CDY56515 | Canola | cytosol | 10.83 | 27.11 |
| CDY62143 | Canola | cytosol | 10.83 | 27.11 |
Protein Annotations
| Gene3D:3.30.559.10 | MapMan:7.5.1.2 | GO:A0A078FBS3 | UniProt:A0A078FBS3 | InterPro:Aminotrans_IV | InterPro:Aminotransferase-like |
| InterPro:CAT-like_dom_sf | EnsemblPlants:CDY11845 | ProteinID:CDY11845 | ProteinID:CDY11845.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | GO:GO:0016747 | EnsemblPlantsGene:GSBRNA2T00060669001 | InterPro:IPR023213 |
| PFAM:PF01063 | PFAM:PF02458 | PANTHER:PTHR31642 | PANTHER:PTHR31642:SF66 | SUPFAM:SSF56752 | InterPro:Transferase |
| UniParc:UPI0004EF0156 | SEG:seg | : | : | : | : |
Description
BnaC03g12710DBnaC03g12710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBS3]
Coordinates
chrLK032015:+:39292..43688
Molecular Weight (calculated)
106118.0 Da
IEP (calculated)
6.867
GRAVY (calculated)
-0.050
Length
951 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIHVKQATI VKPAEETPIH SLWLSNLDLI QVRFHMGILY FYNPCSSSSS LPNTQSLIDA LRKVLVLFYP AAGRLQKDKN GRLEVLCNGE GVLLVEAETD
101: STIQDVGLLT QALDLSQFVP TLAYSGDISS QPLLLFQVTY FKCGAICIGT LIHHSFGDGG SLTCFMEAWS RTARGLPVTP TPFFDRTVLR AQDPPSPLFP
201: HTEYQPPPFH NTPVTSLAYR SNPDFDSGVV SLKLTRLQLR ALRAKAEIAD HKSISAYELL VAHIWRCACF ANEGLREEHL TRLHIILDGR EPFSKTVKRV
301: HEEIKKMDKK YLRSAIDCLE KHPDLDQLVP GEGNPIFSCA ANFCIVSLPK DTAYELDFGW GKPFFKRTSH LNEGKGFVGM SLDEEGSFLV FMCLKKTQLT
401: EGPNMNVAFV VNGGKELVMP RFDNVLNGCT AKRTITLAEQ LVSKGMLISV RVMDMTVEDE KKGDEMMLLG SGVLVKPVIQ WDEEVIADAS TPQTSFLFFC
501: LSKVEVVTKV MKIHVKQATI VKPAEETPRH GLWLSNLDLI QVRFHMGILY FYNPSSSSSS LPNTESLIDA LRKVLVLFYP AAGRLQKDKN GRLEVLCNGE
601: GVLLVEAETD STLQDIGLLN QNLDLSQLMP TLDYSGDISS VPLILLQVTY FKCGAICIGN SIHHTFGDAG SLVCFMEAWS RTARGLQVKV SPFFDRTVLC
701: ARDPPSPVFP HTEYKPPPLH NPPVESLAYR SNPDSDSGVA SLKLTRLQVK ALRAKAEVAG STYELLVAHI WRCACFANED LGEEHLTRLH IIIDGRSRLQ
801: PKLPQGYIGN TLFHARPISL LGEFLREPFS ATVKRVHEEI KKMDNEYLRS AIDSLETHPD LDQLVPGEGN PIFSCAANFC IVGLLKQTVY ELDFGWGRPF
901: FKRTSHLNEG KGFVGMSLDE EGSFIVFMCL KKTQLSKFQK LFYEFLNVSA L
101: STIQDVGLLT QALDLSQFVP TLAYSGDISS QPLLLFQVTY FKCGAICIGT LIHHSFGDGG SLTCFMEAWS RTARGLPVTP TPFFDRTVLR AQDPPSPLFP
201: HTEYQPPPFH NTPVTSLAYR SNPDFDSGVV SLKLTRLQLR ALRAKAEIAD HKSISAYELL VAHIWRCACF ANEGLREEHL TRLHIILDGR EPFSKTVKRV
301: HEEIKKMDKK YLRSAIDCLE KHPDLDQLVP GEGNPIFSCA ANFCIVSLPK DTAYELDFGW GKPFFKRTSH LNEGKGFVGM SLDEEGSFLV FMCLKKTQLT
401: EGPNMNVAFV VNGGKELVMP RFDNVLNGCT AKRTITLAEQ LVSKGMLISV RVMDMTVEDE KKGDEMMLLG SGVLVKPVIQ WDEEVIADAS TPQTSFLFFC
501: LSKVEVVTKV MKIHVKQATI VKPAEETPRH GLWLSNLDLI QVRFHMGILY FYNPSSSSSS LPNTESLIDA LRKVLVLFYP AAGRLQKDKN GRLEVLCNGE
601: GVLLVEAETD STLQDIGLLN QNLDLSQLMP TLDYSGDISS VPLILLQVTY FKCGAICIGN SIHHTFGDAG SLVCFMEAWS RTARGLQVKV SPFFDRTVLC
701: ARDPPSPVFP HTEYKPPPLH NPPVESLAYR SNPDSDSGVA SLKLTRLQVK ALRAKAEVAG STYELLVAHI WRCACFANED LGEEHLTRLH IIIDGRSRLQ
801: PKLPQGYIGN TLFHARPISL LGEFLREPFS ATVKRVHEEI KKMDNEYLRS AIDSLETHPD LDQLVPGEGN PIFSCAANFC IVGLLKQTVY ELDFGWGRPF
901: FKRTSHLNEG KGFVGMSLDE EGSFIVFMCL KKTQLSKFQK LFYEFLNVSA L
001: MKIRVKQATI VKPAEETPTH NLWLSNLDLI QVRLHMGTLY FYKPCSSSDR PNTQSLIEAL SKVLVFFYPA AGRLQKNTNG RLEVQCNGEG VLFVEAESDS
101: TVQDIGLLTQ SLDLSQLVPT VDYAGDISSY PLLLFQVTYF KCGTICVGSS IHHTFGEATS LGYIMEAWSL TARGLLVKLT PFLDRTVLHA RNPPSSVFPH
201: TEYQSPPFHN HPMKSLAYRS NPESDSAIAT LKLTRLQLKA LKARAEIADS KFSTYEVLVA HTWRCASFAN EDLSEEHSTR LHIIIDGRPR LQPKLPQGYI
301: GNTLFHARPV SPLGAFHRES FSETVERVHR EIRKMDNEYL RSAIDYLERH PDLDQLVPGE GNTIFSCAAN FCIVSLIKQT AYEMDFGWGK AYYKRASHLN
401: EGKGFVTGNP DEEGSMMLTM CLKKTQLSKF RKLFYEFLNV SAL
101: TVQDIGLLTQ SLDLSQLVPT VDYAGDISSY PLLLFQVTYF KCGTICVGSS IHHTFGEATS LGYIMEAWSL TARGLLVKLT PFLDRTVLHA RNPPSSVFPH
201: TEYQSPPFHN HPMKSLAYRS NPESDSAIAT LKLTRLQLKA LKARAEIADS KFSTYEVLVA HTWRCASFAN EDLSEEHSTR LHIIIDGRPR LQPKLPQGYI
301: GNTLFHARPV SPLGAFHRES FSETVERVHR EIRKMDNEYL RSAIDYLERH PDLDQLVPGE GNTIFSCAAN FCIVSLIKQT AYEMDFGWGK AYYKRASHLN
401: EGKGFVTGNP DEEGSMMLTM CLKKTQLSKF RKLFYEFLNV SAL
Arabidopsis Description
AT5g57840/MTI20_9 [Source:UniProtKB/TrEMBL;Acc:Q9FJN0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.