Factsheet for Os08t0426866-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0763750-01
Os01t0853800-01
Os02t0512400-01
Os03t0167700-01
Os03t0805300-01
Os04t0393500-01
Os04t0406600-01
Os04t0679600-01
Os07t0520400-01
Os08t0428400-01
Os09t0565700-01
Os09t0566050-00
Os10t0410600-02
Os10t0499400-01
Os10t0512800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G16560.1	Os01t0853800-01	AT1G07310.1	21798944
AT5G16560.1	Os08t0428400-01	AT3G17860.1	21798944
AT5G16560.1	Os04t0406600-01	AT3G44720.1	21798944
AT5G16560.1	Os09t0565700-01	AT3G44720.1	21798944
AT5G16560.1	Os09t0566050-00	AT3G44720.1	21798944
AT5G16560.1	Os03t0167700-01	AT3G58500.1	21798944
AT5G16560.1	Os03t0805300-01	AT3G58500.1	21798944
AT5G16560.1	Os10t0410600-02	AT3G58500.1	21798944
AT5G16560.1	Os07t0520400-01	AT4G27060.1	21798944
AT5G16560.1	Os04t0679600-01	AT4G27460.1	21798944
AT5G16560.1	Os10t0499400-01	AT4G27460.1	21798944
AT5G16560.1	Os10t0512800-01	AT4G39050.1	21798944
AT5G16560.1	Os02t0512400-01	AT5G14070.1	21798944
AT5G16560.1	Os04t0393500-01	AT5G14070.1	21798944
AT5G16560.1	Os01t0763750-01	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25180	Sorghum	nucleus	57.91	57.05
Os09t0395300-01	Rice	nucleus	40.38	50.13
Bra008613.1-P	Field mustard	nucleus	24.79	39.86
Zm00001d032249_P002	Maize	plastid	40.17	39.0
CDY28659	Canola	nucleus	25.21	38.69
CDX78699	Canola	nucleus	31.84	38.6
CDX70701	Canola	nucleus	31.62	38.44
CDX69443	Canola	nucleus	31.84	37.91
CDX85500	Canola	nucleus	32.27	37.84
CDY67252	Canola	nucleus	31.84	37.82
CDY38105	Canola	nucleus	31.84	37.44
Os03t0624000-00	Rice	nucleus	14.53	37.36
AT5G16560.1	Thale cress	nucleus	32.05	37.22
Solyc06g066340.2.1	Tomato	nucleus	22.86	36.77
VIT_04s0043g00340.t01	Wine grape	nucleus	35.68	35.76
Os08t0160300-00	Rice	nucleus	26.07	35.36
Bra023570.1-P	Field mustard	cytosol	27.99	32.91
PGSC0003DMT400043200	Potato	nucleus	26.07	30.65
KRH48713	Soybean	nucleus	26.5	29.81
KRH39002	Soybean	nucleus	26.07	29.61
GSMUA_Achr4P04510_001	Banana	nucleus	23.08	28.8
Os11t0106100-00	Rice	nucleus	11.97	26.29
Os02t0696900-00	Rice	plasma membrane	20.51	26.02
Os03t0766500-01	Rice	mitochondrion	21.15	25.26
Os06t0670300-01	Rice	nucleus	9.83	17.97
Os04t0566600-01	Rice	extracellular	10.68	16.34
Os12t0105600-01	Rice	nucleus	10.9	16.24
Bra006360.1-P	Field mustard	nucleus	22.01	14.05
Os06t0543200-01	Rice	nucleus	13.89	11.97
Os02t0241200-00	Rice	nucleus	13.68	11.74
Os12t0591600-01	Rice	nucleus	4.49	10.5

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	UniProt:A0A0P0XFY4	ProteinID:BAT05511.1	GO:GO:0000003	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009987	GO:GO:0010158	GO:GO:0010229
GO:GO:0030154	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os08g0426866	EnsemblPlants:Os08t0426866-00
PFAM:PF00249	PANTHER:PTHR31496	PANTHER:PTHR31496:SF11	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
UniParc:UPI0003938882	SEG:seg	:	:	:	:

Description

Similar to Kanadi1. (Os08t0426866-00)

Coordinates

chr8:+:20528683..20534865

Molecular Weight (calculated)

47349.1 Da

IEP (calculated)

8.184

GRAVY (calculated)

-0.264

Length

468 amino acids

Sequence
(BLAST)

001: MASATSTTPD LSLHISLPSG GAAVGTTAPP GLGNGGAVGG AGGGKAAGGG DPWRRLDGST ASTELSLSTP QQQQEGSTSA ADVLPWRLRQ PTAAAASVPV
101: TLPTIPMDGS AAAARAPIRG VPVYSGGGGG GHPFLGGGGG DHRHNRLYNP YHSTAWPSSS LCSTSPAPAP PPPPAALDPT TSSLLSPSAY HRMLSSTGRL
201: HGVLADTLRG YAGAAAVAGS IGYGSAAAAA AAMGGYGGAG AGGGFASSRF MPRLLPASRR SMRAPRMRWT SSLHARFVHA VELLGGHERA TPKSVLELMD
301: VKDLTLAHVK SHLQMYRTVK STDKPAAASG PMDGSGSGSG SGDDELLAGD GRQATSSGAD ADRRMSFTEH RSSSEGAASH AGGGGDGDCS SSAVNSDTIR
401: ARSNSPRDLW LSSSVCNMDP QHLVTVEVWI LIRLTSLSSS LQVSSHELSS PSLEFTLGRP SWHSIDHD

Best Arabidopsis Sequence Match ( AT5G16560.1 )
(BLAST)

001: MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ
101: RVDESEISNL HRPIRGIPVY HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ YGVVGSSDSS SPHHHNHHHH
201: GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH
301: HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW
401: HEK

Arabidopsis Description

KAN1Transcription repressor KAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q93WJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.