Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0058g00250.t01 | Wine grape | nucleus | 17.52 | 47.41 |
| Solyc09g005030.1.1 | Tomato | nucleus | 20.06 | 43.15 |
| VIT_06s0004g07000.t01 | Wine grape | nucleus | 22.93 | 40.68 |
| Os11t0106100-00 | Rice | nucleus | 26.11 | 38.5 |
| TraesCS5A01G153000.1 | Wheat | nucleus | 31.85 | 30.67 |
| TraesCS5D01G158300.1 | Wheat | nucleus | 31.53 | 30.56 |
| TraesCS5B01G151800.1 | Wheat | nucleus | 32.17 | 29.97 |
| EES15503 | Sorghum | nucleus | 34.39 | 29.51 |
| Zm00001d005087_P001 | Maize | nucleus | 31.85 | 28.74 |
| EES09087 | Sorghum | nucleus | 32.8 | 28.37 |
| TraesCS4A01G180900.1 | Wheat | nucleus | 30.57 | 28.15 |
| TraesCS4D01G131500.1 | Wheat | nucleus | 30.57 | 28.15 |
| TraesCS4B01G136900.1 | Wheat | nucleus | 29.94 | 27.73 |
| KRH75999 | Soybean | nucleus | 28.66 | 26.24 |
| Solyc06g051060.2.1 | Tomato | nucleus | 21.02 | 25.98 |
| Solyc10g076460.1.1 | Tomato | nucleus | 24.52 | 25.5 |
| PGSC0003DMT400041071 | Potato | nucleus | 24.2 | 25.17 |
| KRH65638 | Soybean | nucleus | 27.07 | 24.57 |
| PGSC0003DMT400068508 | Potato | nucleus | 25.48 | 24.46 |
| GSMUA_Achr7P22410_001 | Banana | nucleus | 25.8 | 24.4 |
| KRH00305 | Soybean | nucleus | 28.34 | 24.12 |
| KRH49433 | Soybean | nucleus | 28.03 | 24.04 |
| CDY52431 | Canola | nucleus | 28.66 | 23.14 |
| Bra000180.1-P | Field mustard | nucleus | 28.34 | 22.88 |
| CDY07612 | Canola | nucleus | 28.34 | 22.7 |
| PGSC0003DMT400077217 | Potato | nucleus | 27.07 | 22.31 |
| CDY07070 | Canola | nucleus | 28.03 | 21.15 |
| CDX93206 | Canola | nucleus | 28.03 | 21.05 |
| Os04t0566600-01 | Rice | extracellular | 20.38 | 20.91 |
| CDX74803 | Canola | nucleus | 25.48 | 20.83 |
| AT2G40260.1 | Thale cress | nucleus | 26.75 | 20.49 |
| Bra004973.1-P | Field mustard | nucleus | 26.43 | 20.39 |
| CDY18860 | Canola | nucleus | 26.43 | 20.39 |
| Os06t0670300-01 | Rice | nucleus | 16.24 | 19.92 |
| VIT_13s0067g01500.t01 | Wine grape | extracellular, vacuole | 26.43 | 17.7 |
| Os03t0624000-00 | Rice | nucleus | 10.19 | 17.58 |
| Os02t0241200-00 | Rice | nucleus | 28.34 | 16.33 |
| Os06t0543200-01 | Rice | nucleus | 27.39 | 15.84 |
| Os08t0160300-00 | Rice | nucleus | 16.24 | 14.78 |
| Os03t0766500-01 | Rice | mitochondrion | 17.52 | 14.03 |
| Os09t0395300-01 | Rice | nucleus | 16.56 | 13.79 |
| Os02t0696900-00 | Rice | plasma membrane | 14.01 | 11.92 |
| Os08t0426866-00 | Rice | nucleus | 16.24 | 10.9 |
| Bra017021.1-P | Field mustard | nucleus | 12.1 | 10.44 |
| Os12t0591600-01 | Rice | nucleus | 4.78 | 7.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | EntrezGene:4351260 | ProteinID:ABA95608.1 | ProteinID:BAF28952.1 | ProteinID:BAT15492.1 |
| ProteinID:EAZ19374.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlantsGene:Os12g0105600 | EnsemblPlants:Os12t0105600-01 | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR31314 | PANTHER:PTHR31314:SF2 | UniProt:Q2QYV2 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI0000681BCA | RefSeq:XP_015620339.1 | SEG:seg | : | : | : |
Description
Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1). (Os12t0105600-01)
Coordinates
chr12:-:296660..298784
Molecular Weight (calculated)
34552.1 Da
IEP (calculated)
7.868
GRAVY (calculated)
-0.830
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTSAGKEE GSESKTAAAN NDGSSTSSTT EEEESGESQR RTSSSSSVRP YIRSKNPRLR WTPELHLSFV RAVDRLGGQD RATPKLVLQL MNVRGLSIGH
101: VKSHLQMYRS KKIDESGQVI GGGSWRSSDE QQYHHLQMQG GGDGGQAYNL GHLSLPAALH HRHITAGSGT ILQSRVANAW SPWRCHGSYW LRAGHHLLVG
201: SKPYYPPPPA EARANTSSNH PDFVQGSSSS PDDHTMNHQR PVVLKEMIYN EGSNHQGGPL NLDLSLDICP RGEKRKRELI SWRKHEEDHD HTTIAIGGDQ
301: EAESCATGLS LSLF
101: VKSHLQMYRS KKIDESGQVI GGGSWRSSDE QQYHHLQMQG GGDGGQAYNL GHLSLPAALH HRHITAGSGT ILQSRVANAW SPWRCHGSYW LRAGHHLLVG
201: SKPYYPPPPA EARANTSSNH PDFVQGSSSS PDDHTMNHQR PVVLKEMIYN EGSNHQGGPL NLDLSLDICP RGEKRKRELI SWRKHEEDHD HTTIAIGGDQ
301: EAESCATGLS LSLF
001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
Arabidopsis Description
Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.