Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0058g00250.t01 | Wine grape | nucleus | 19.88 | 56.9 |
| Solyc09g005030.1.1 | Tomato | nucleus | 21.69 | 49.32 |
| GSMUA_Achr5P00310_001 | Banana | nucleus | 11.75 | 43.33 |
| GSMUA_Achr9P30700_001 | Banana | mitochondrion | 13.55 | 41.28 |
| VIT_06s0004g07000.t01 | Wine grape | nucleus | 21.99 | 41.24 |
| Solyc06g051060.2.1 | Tomato | nucleus | 28.31 | 37.01 |
| Os11t0106100-00 | Rice | nucleus | 23.49 | 36.62 |
| PGSC0003DMT400041071 | Potato | nucleus | 31.02 | 34.11 |
| Solyc10g076460.1.1 | Tomato | nucleus | 30.72 | 33.77 |
| KRH75999 | Soybean | nucleus | 33.43 | 32.36 |
| KRH65638 | Soybean | nucleus | 32.23 | 30.92 |
| KRH49433 | Soybean | nucleus | 33.73 | 30.6 |
| PGSC0003DMT400068508 | Potato | nucleus | 30.12 | 30.58 |
| KRH00305 | Soybean | nucleus | 33.73 | 30.35 |
| TraesCS5A01G153000.1 | Wheat | nucleus | 29.52 | 30.06 |
| TraesCS5D01G158300.1 | Wheat | nucleus | 28.92 | 29.63 |
| TraesCS5B01G151800.1 | Wheat | nucleus | 29.82 | 29.38 |
| PGSC0003DMT400077217 | Potato | nucleus | 33.43 | 29.13 |
| TraesCS4D01G131500.1 | Wheat | nucleus | 28.92 | 28.15 |
| EES09087 | Sorghum | nucleus | 30.72 | 28.1 |
| Zm00001d005087_P001 | Maize | nucleus | 29.22 | 27.87 |
| EES15503 | Sorghum | nucleus | 30.42 | 27.6 |
| GSMUA_Achr11P... | Banana | nucleus | 18.98 | 26.92 |
| TraesCS4A01G180900.1 | Wheat | nucleus | 27.41 | 26.69 |
| GSMUA_Achr2P06700_001 | Banana | cytosol, nucleus, plastid | 13.55 | 26.63 |
| GSMUA_Achr4P25920_001 | Banana | nucleus | 19.88 | 26.61 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.49 | 26.44 |
| GSMUA_Achr7P03510_001 | Banana | nucleus | 16.27 | 26.21 |
| CDX93206 | Canola | nucleus | 32.53 | 25.84 |
| Os12t0105600-01 | Rice | nucleus | 24.4 | 25.8 |
| CDY07070 | Canola | nucleus | 32.23 | 25.72 |
| TraesCS4B01G136900.1 | Wheat | nucleus | 26.2 | 25.66 |
| GSMUA_Achr5P19200_001 | Banana | nucleus | 21.99 | 25.52 |
| CDX74803 | Canola | nucleus | 29.52 | 25.52 |
| Bra000180.1-P | Field mustard | nucleus | 29.82 | 25.45 |
| CDY52431 | Canola | nucleus | 29.82 | 25.45 |
| CDY07612 | Canola | nucleus | 29.82 | 25.26 |
| AT2G40260.1 | Thale cress | nucleus | 30.72 | 24.88 |
| CDY18860 | Canola | nucleus | 30.42 | 24.82 |
| Bra004973.1-P | Field mustard | nucleus | 30.12 | 24.57 |
| GSMUA_Achr1P23970_001 | Banana | nucleus | 14.46 | 23.41 |
| VIT_13s0067g01500.t01 | Wine grape | extracellular, vacuole | 32.83 | 23.24 |
| GSMUA_Achr7P00680_001 | Banana | cytosol, golgi, nucleus | 15.36 | 22.77 |
| GSMUA_Achr7P09370_001 | Banana | nucleus | 25.6 | 22.49 |
| GSMUA_Achr11P... | Banana | nucleus | 15.96 | 22.36 |
| GSMUA_Achr10P... | Banana | nucleus | 13.86 | 22.01 |
| GSMUA_Achr2P11010_001 | Banana | nucleus | 18.98 | 21.58 |
| GSMUA_Achr9P23320_001 | Banana | nucleus | 14.46 | 21.24 |
| GSMUA_Achr7P13880_001 | Banana | nucleus | 26.2 | 21.22 |
| GSMUA_Achr4P32400_001 | Banana | plastid | 15.96 | 21.12 |
| GSMUA_Achr1P22100_001 | Banana | nucleus | 13.55 | 20.55 |
| GSMUA_Achr2P18070_001 | Banana | nucleus | 16.57 | 20.45 |
| GSMUA_Achr4P23160_001 | Banana | nucleus, plastid | 16.27 | 19.85 |
| GSMUA_Achr10P... | Banana | nucleus | 30.42 | 19.5 |
| GSMUA_Achr3P00380_001 | Banana | nucleus | 15.36 | 19.47 |
| GSMUA_Achr2P13320_001 | Banana | nucleus, plastid | 15.36 | 18.48 |
| GSMUA_Achr10P... | Banana | nucleus | 15.36 | 18.35 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.47 | 17.85 |
| GSMUA_Achr7P02420_001 | Banana | nucleus | 18.07 | 16.95 |
| GSMUA_Achr8P30770_001 | Banana | nucleus | 17.17 | 16.06 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.27 | 15.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 14.76 | 15.65 |
| Bra017021.1-P | Field mustard | nucleus | 16.87 | 15.38 |
| GSMUA_Achr8P22900_001 | Banana | nucleus | 16.87 | 14.85 |
| GSMUA_Achr4P04510_001 | Banana | nucleus | 16.27 | 14.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.36 | 12.88 |
| GSMUA_Achr1P06280_001 | Banana | mitochondrion, nucleus | 15.96 | 12.83 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr7G22410_001 |
| EnsemblPlants:GSMUA_Achr7P22410_001 | EnsemblPlants:GSMUA_Achr7T22410_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0TJS7 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31314 | PANTHER:PTHR31314:SF41 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0002954973 | SEG:seg | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_58.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G22410_001]
Coordinates
chr7:+:24898605..24900090
Molecular Weight (calculated)
37337.7 Da
IEP (calculated)
8.885
GRAVY (calculated)
-0.807
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGSAISR RSSPSERDMV EEDGEDSPRN GGSSSNSTVE ENDRKVAVRQ YVRSKNPRLR WTPDLHLCFV HAVERLGGKD RATPKLVLQL MNVKGLSIAH
101: VKSHLQMYRS KNEDSGHGID LNLIHTTHYI SFCFCNQLQL MIAASPFAIA NPRNLMQGGQ PHAYSLSHLP LLHAFHQRPN SKSRPDDVSW GSHRYWMPNQ
201: ILARAMATTG SGSYTEMILG EKSRITSNQD TGKGSETQLF HDHTGHKPRE TESCYFRTRI EERRQVRREA GDHEPDLALS LHTGPRQEKR PKTWEEEQVD
301: SNLSLALFPP SSSSLDIWSR DDAKASSRST AG
101: VKSHLQMYRS KNEDSGHGID LNLIHTTHYI SFCFCNQLQL MIAASPFAIA NPRNLMQGGQ PHAYSLSHLP LLHAFHQRPN SKSRPDDVSW GSHRYWMPNQ
201: ILARAMATTG SGSYTEMILG EKSRITSNQD TGKGSETQLF HDHTGHKPRE TESCYFRTRI EERRQVRREA GDHEPDLALS LHTGPRQEKR PKTWEEEQVD
301: SNLSLALFPP SSSSLDIWSR DDAKASSRST AG
001: MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
101: SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW
201: TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD
301: QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL
Arabidopsis Description
Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.